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unnamed_protein_product
Euk-VirCyprinid_herpesvirus_3
unnamed_protein_product__YP_001096111__Cyprinid_herpesvirus_3__180230
Identity
- Accession:
- YP_001096111 ↗
- Protein ID:
- unnamed_protein_product
- Kingdom:
- euk
Quality
53.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_3
TaxID: 180230
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 101-169
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 4.41e-01 | 89.9% | 91.1% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.62 | 44.0 | 3.63e-01 | 76.8% | 88.8% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.61 | 52.0 | 4.98e-01 | 97.1% | 92.6% |
| 1oisA01 | 1.10.10.41 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Yeast DNA topoisomerase - domain 1 | 0.61 | 53.0 | 4.85e-01 | 100.0% | 75.0% |
| 4o8sA02 | 1.20.58.1790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › JHP933, helical tail domain | 0.59 | 46.0 | 4.08e-01 | 87.0% | 86.0% |
| 1h1oA01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.59 | 49.0 | 4.81e-01 | 97.1% | 100.0% |
| 3geeA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.57 | 44.0 | 3.46e-01 | 89.9% | 89.3% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.55 | 45.0 | 3.95e-01 | 97.1% | 62.8% |
| 2pusA04 | 6.10.140.300 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 38.0 | 3.38e-01 | 79.7% | 71.3% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 38.0 | 2.63e-01 | 79.7% | 84.8% |
| 6gwuD00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.51 | 40.0 | 2.97e-01 | 89.9% | 75.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3898240 | 592.6.1.1 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug | 0.60 | 52.0 | 4.34e-01 | 98.6% | 56.8% |
| 4994837 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.60 | 45.0 | 4.19e-01 | 84.1% | 73.3% |
| 3815745 | 592.6.1.1 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug | 0.57 | 47.0 | 4.57e-01 | 98.6% | 82.5% |
| 5030226 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.55 | 46.0 | 3.07e-01 | 98.6% | 57.7% |
| 1068648 | 3720.1.1.1 ↗ | alpha bundles › Receptor activity-modifying protein (RAMP) › Receptor activity-modifying protein (RAMP) › Receptor activity-modifying protein (RAMP) › RAMP | 0.50 | 40.0 | 3.75e-01 | 91.3% | 80.2% |
D2
medium
residues 173-238