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unnamed_protein_product
Euk-VirCyprinid_herpesvirus_3
unnamed_protein_product__YP_001096128__Cyprinid_herpesvirus_3__180230
Identity
- Accession:
- YP_001096128 ↗
- Protein ID:
- unnamed_protein_product
- Kingdom:
- euk
Quality
61.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_3
TaxID: 180230
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 62-128
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.95 | 88.0 | 7.21e-01 | 98.5% | 59.6% |
| 3u0cA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.95 | 90.0 | 6.64e-01 | 100.0% | 62.9% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.95 | 90.0 | 7.91e-01 | 100.0% | 72.8% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.92 | 81.0 | 5.64e-01 | 92.5% | 100.0% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.92 | 87.0 | 8.22e-01 | 100.0% | 88.3% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.92 | 86.0 | 5.84e-01 | 100.0% | 33.3% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.92 | 85.0 | 7.39e-01 | 98.5% | 68.8% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.92 | 85.0 | 6.95e-01 | 100.0% | 57.9% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.92 | 86.0 | 7.77e-01 | 100.0% | 76.7% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.92 | 86.0 | 5.67e-01 | 100.0% | 46.2% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.92 | 71.0 | 6.38e-01 | 98.5% | 62.1% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.91 | 75.0 | 8.02e-01 | 86.6% | 100.0% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.91 | 84.0 | 5.28e-01 | 100.0% | 23.0% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.91 | 85.0 | 8.23e-01 | 100.0% | 91.8% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.90 | 79.0 | 7.73e-01 | 92.5% | 87.3% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.90 | 82.0 | 8.39e-01 | 98.5% | 100.0% |
| 2dq0A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.90 | 84.0 | 7.03e-01 | 100.0% | 63.6% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.90 | 71.0 | 6.88e-01 | 86.6% | 75.7% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 78.0 | 8.10e-01 | 92.5% | 98.4% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 82.0 | 6.61e-01 | 100.0% | 55.7% |
| 1gaxA05 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.89 | 78.0 | 7.61e-01 | 94.0% | 91.8% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.89 | 78.0 | 5.49e-01 | 94.0% | 67.4% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.89 | 81.0 | 6.79e-01 | 100.0% | 61.3% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.88 | 74.0 | 6.99e-01 | 91.0% | 100.0% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.87 | 79.0 | 5.87e-01 | 100.0% | 80.5% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.86 | 80.0 | 6.63e-01 | 100.0% | 64.5% |
| 3rx6A00 | 1.20.58.1090 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer | 0.86 | 79.0 | 5.60e-01 | 100.0% | 38.5% |
| 4abxA02 | 6.10.140.1090 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 76.0 | 6.86e-01 | 94.0% | 82.8% |
| 1t7sA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.86 | 78.0 | 6.20e-01 | 100.0% | 51.9% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.85 | 70.0 | 7.39e-01 | 97.0% | 98.3% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.85 | 76.0 | 7.49e-01 | 95.5% | 95.8% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.85 | 78.0 | 5.08e-01 | 100.0% | 27.1% |
| 2dw4A03 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.85 | 79.0 | 6.77e-01 | 100.0% | 85.1% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.84 | 77.0 | 6.64e-01 | 100.0% | 68.6% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 73.0 | 6.21e-01 | 100.0% | 60.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.84 | 76.0 | 5.46e-01 | 100.0% | 92.9% |
| 3syvA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.84 | 75.0 | 5.05e-01 | 100.0% | 27.8% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.84 | 71.0 | 6.50e-01 | 91.0% | 74.1% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.84 | 77.0 | 5.29e-01 | 100.0% | 33.0% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.83 | 76.0 | 5.23e-01 | 97.0% | 37.5% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 74.0 | 6.77e-01 | 100.0% | 100.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.82 | 67.0 | 7.04e-01 | 92.5% | 96.7% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.82 | 73.0 | 4.94e-01 | 100.0% | 27.7% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.81 | 74.0 | 6.80e-01 | 100.0% | 85.9% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 68.0 | 6.58e-01 | 95.5% | 81.6% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.80 | 71.0 | 6.20e-01 | 98.5% | 67.6% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.80 | 67.0 | 5.13e-01 | 91.0% | 40.7% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.80 | 72.0 | 5.14e-01 | 100.0% | 42.7% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.80 | 72.0 | 5.88e-01 | 100.0% | 64.2% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.80 | 66.0 | 6.21e-01 | 100.0% | 75.6% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 64.0 | 6.73e-01 | 94.0% | 98.3% |
| 3qf7A02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.79 | 70.0 | 7.21e-01 | 97.0% | 100.0% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.79 | 69.0 | 5.43e-01 | 100.0% | 48.3% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.78 | 68.0 | 6.81e-01 | 98.5% | 97.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 64.0 | 6.68e-01 | 100.0% | 100.0% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.78 | 67.0 | 6.24e-01 | 100.0% | 79.1% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.78 | 66.0 | 5.06e-01 | 100.0% | 41.3% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.77 | 65.0 | 5.12e-01 | 92.5% | 45.9% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.77 | 66.0 | 5.16e-01 | 98.5% | 49.7% |
| 3pt1A02 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.77 | 64.0 | 5.24e-01 | 91.0% | 76.7% |
| 2yevC00 | 6.10.280.110 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 64.0 | 6.56e-01 | 94.0% | 100.0% |
| 4y9jA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.76 | 67.0 | 5.18e-01 | 100.0% | 57.7% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 65.0 | 6.51e-01 | 100.0% | 95.5% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 64.0 | 5.69e-01 | 100.0% | 66.7% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 66.0 | 5.55e-01 | 100.0% | 64.9% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.75 | 59.0 | 5.00e-01 | 92.5% | 51.8% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 65.0 | 4.96e-01 | 100.0% | 43.5% |
| 1v9dB00 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.74 | 64.0 | 4.14e-01 | 100.0% | 20.9% |
| 3vkgB06 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.73 | 64.0 | 4.36e-01 | 100.0% | 27.8% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 63.0 | 5.33e-01 | 97.0% | 58.9% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.73 | 65.0 | 5.40e-01 | 100.0% | 73.5% |
| 5k3hB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.71 | 60.0 | 4.90e-01 | 98.5% | 50.4% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.70 | 57.0 | 4.93e-01 | 89.6% | 57.5% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.70 | 59.0 | 5.37e-01 | 95.5% | 71.1% |
| 4mk3A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 60.0 | 5.08e-01 | 100.0% | 60.0% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 57.0 | 5.79e-01 | 100.0% | 96.9% |
| 2q5zB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.66 | 53.0 | 4.74e-01 | 91.0% | 62.8% |
| 4nphA02 | 1.20.1270.330 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.55 | 46.0 | 4.48e-01 | 92.5% | 86.5% |
| 8d8lN01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 45.0 | 4.22e-01 | 98.5% | 88.4% |
| 5aj3N01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 45.0 | 4.19e-01 | 100.0% | 91.2% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4013484 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.96 | 92.0 | 6.20e-01 | 100.0% | 39.5% |
| 3408277 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.96 | 92.0 | 7.38e-01 | 100.0% | 59.1% |
| 3294437 | 5086.1.1.110 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA | 0.96 | 91.0 | 8.46e-01 | 100.0% | 83.7% |
| 3339561 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.95 | 90.0 | 7.70e-01 | 100.0% | 67.0% |
| 3486831 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.95 | 90.0 | 5.86e-01 | 100.0% | 27.8% |
| 3967403 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.95 | 88.0 | 8.95e-01 | 97.0% | 100.0% |
| 4259224 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.95 | 90.0 | 6.58e-01 | 100.0% | 43.2% |
| 3620978 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.95 | 90.0 | 5.53e-01 | 100.0% | 21.3% |
| 139445 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.95 | 90.0 | 7.62e-01 | 100.0% | 66.3% |
| 3215465 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.94 | 89.0 | 6.92e-01 | 100.0% | 52.3% |
| 3223800 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.94 | 89.0 | 6.54e-01 | 100.0% | 43.2% |
| 4357799 | 192.13.1.1 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 | 0.94 | 81.0 | 6.23e-01 | 89.6% | 46.2% |
| 3716516 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.94 | 88.0 | 6.49e-01 | 100.0% | 43.2% |
| 3962991 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.94 | 89.0 | 6.11e-01 | 100.0% | 34.9% |
| 3885709 | 192.13.1.0 ↗ | alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like | 0.94 | 80.0 | 7.65e-01 | 89.6% | 80.0% |
| 3623143 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.94 | 89.0 | 8.07e-01 | 100.0% | 80.0% |
| 4576425 | 4207.1.1.112 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › ING | 0.93 | 89.0 | 7.30e-01 | 100.0% | 60.9% |
| 3356933 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.93 | 88.0 | 6.48e-01 | 100.0% | 43.2% |
| 3594586 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.93 | 88.0 | 7.68e-01 | 100.0% | 71.6% |
| 3495261 | 109.4.1.1844 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_10, TPR_12 | 0.93 | 88.0 | 5.15e-01 | 100.0% | 15.6% |
| 3871879 | 3755.3.1.44 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › JMY | 0.93 | 87.0 | 5.27e-01 | 100.0% | 18.4% |
| 3260973 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.93 | 88.0 | 7.22e-01 | 100.0% | 60.9% |
| 3737668 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.93 | 87.0 | 7.09e-01 | 100.0% | 59.1% |
| 5070736 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.93 | 88.0 | 6.01e-01 | 100.0% | 44.5% |
| 3251379 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.93 | 85.0 | 7.80e-01 | 100.0% | 77.6% |
| 3608012 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.93 | 88.0 | 7.98e-01 | 100.0% | 87.1% |
| 3218199 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.92 | 87.0 | 7.76e-01 | 100.0% | 75.6% |
| 3808845 | 5086.1.1.90 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › V_ATPase_I | 0.92 | 87.0 | 6.48e-01 | 100.0% | 45.3% |
| 3880178 | 192.8.1.92 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CUPID | 0.92 | 81.0 | 7.59e-01 | 94.0% | 78.8% |
| 3631949 | 309.1.2.5 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › Seryl_tRNA_N | 0.92 | 86.0 | 6.83e-01 | 100.0% | 54.4% |
| 3534501 | 3755.3.1.293 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › TBCA_PH | 0.92 | 87.0 | 6.44e-01 | 100.0% | 64.0% |
| 3215426 | 192.29.1.172 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29678 | 0.92 | 86.0 | 6.73e-01 | 100.0% | 51.5% |
| 3783731 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.92 | 84.0 | 4.99e-01 | 100.0% | 15.5% |
| 4927769 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.92 | 86.0 | 7.56e-01 | 100.0% | 72.0% |
| 3920125 | 3755.3.1.450 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Uso1_p115_C | 0.91 | 85.0 | 5.89e-01 | 100.0% | 49.2% |
| 3491738 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.91 | 85.0 | 7.29e-01 | 100.0% | 67.7% |
| 4124331 | 192.15.1.76 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID | 0.91 | 79.0 | 6.52e-01 | 92.5% | 56.4% |
| 4349607 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.91 | 85.0 | 7.03e-01 | 100.0% | 61.8% |
| 4667859 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.91 | 86.0 | 6.95e-01 | 100.0% | 59.1% |
| 3178900 | 192.2.1.30 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Uds1 | 0.90 | 84.0 | 6.38e-01 | 100.0% | 51.7% |
| 4228031 | 109.4.1.128 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G_like_2 | 0.90 | 84.0 | 5.36e-01 | 100.0% | 23.6% |
| 3731259 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.90 | 86.0 | 6.04e-01 | 100.0% | 37.4% |
| 4028999 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.90 | 83.0 | 8.42e-01 | 98.5% | 100.0% |
| 2878134 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.90 | 84.0 | 6.43e-01 | 100.0% | 48.6% |
| 3841109 | 192.29.1.293 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › SHCBP_N | 0.90 | 83.0 | 7.07e-01 | 100.0% | 65.0% |
| 4300897 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.90 | 84.0 | 6.58e-01 | 100.0% | 52.3% |
| 3933449 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.90 | 83.0 | 7.42e-01 | 100.0% | 75.6% |
| 3740547 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.90 | 84.0 | 6.95e-01 | 100.0% | 60.9% |
| 4277985 | 2004.1.1.481 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_29 | 0.89 | 85.0 | 5.06e-01 | 100.0% | 17.4% |
| 3203993 | 3755.4.1.22 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › DUF6594 | 0.89 | 83.0 | 6.57e-01 | 100.0% | 54.4% |
| 3518386 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.89 | 75.0 | 7.26e-01 | 91.0% | 81.3% |
| 3381605 | 109.4.1.146 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load | 0.89 | 81.0 | 4.52e-01 | 95.5% | 12.2% |
| 4184330 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.88 | 82.0 | 7.08e-01 | 100.0% | 68.0% |
| 4589656 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.88 | 82.0 | 6.20e-01 | 100.0% | 46.9% |
| 5039743 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.88 | 81.0 | 5.96e-01 | 100.0% | 91.5% |
| 3869913 | 2004.1.1.442 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21 | 0.88 | 82.0 | 4.84e-01 | 100.0% | 18.9% |
| 4146694 | 192.29.1.277 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin | 0.88 | 80.0 | 8.13e-01 | 95.5% | 98.5% |
| 4042007 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.87 | 82.0 | 6.76e-01 | 100.0% | 61.8% |
| 3595868 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.87 | 79.0 | 5.10e-01 | 100.0% | 25.3% |
| 3619200 | 192.15.1.76 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID | 0.87 | 77.0 | 5.80e-01 | 100.0% | 41.9% |
| None | — | 0.86 | 69.0 | 3.88e-01 | 89.6% | 8.2% | |
| 3931883 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.86 | 79.0 | 6.60e-01 | 100.0% | 60.9% |
| 3225544 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.86 | 78.0 | 6.77e-01 | 100.0% | 67.0% |
| 4336172 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.85 | 79.0 | 4.91e-01 | 100.0% | 21.5% |
| 4054050 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.85 | 75.0 | 6.50e-01 | 95.5% | 65.0% |
| 3964578 | 5094.1.1.1 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH | 0.85 | 79.0 | 6.06e-01 | 100.0% | 47.9% |
| 3192393 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.85 | 79.0 | 4.49e-01 | 98.5% | 38.0% |
| 3585791 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.85 | 76.0 | 7.32e-01 | 97.0% | 86.7% |
| 3990182 | 3922.1.1.226 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3 | 0.85 | 78.0 | 6.41e-01 | 100.0% | 58.3% |
| 4435642 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.85 | 75.0 | 6.48e-01 | 95.5% | 65.0% |
| 3964486 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.85 | 78.0 | 5.78e-01 | 100.0% | 73.1% |
| 3766956 | 622.4.1.22 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › FAM186A-B_N | 0.84 | 73.0 | 5.93e-01 | 94.0% | 52.5% |
| 4940229 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.84 | 71.0 | 4.34e-01 | 100.0% | 16.5% |
| 3235839 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.83 | 76.0 | 5.50e-01 | 100.0% | 73.1% |
| 3783600 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.83 | 74.0 | 6.23e-01 | 100.0% | 62.7% |
| 4293733 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.82 | 75.0 | 6.40e-01 | 100.0% | 64.8% |
| 5076586 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.82 | 72.0 | 6.32e-01 | 98.5% | 66.3% |
| 3435097 | 4177.1.1.11 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF632 | 0.81 | 72.0 | 4.77e-01 | 100.0% | 25.7% |
| 4232718 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.80 | 73.0 | 6.38e-01 | 100.0% | 67.0% |
| 3947741 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.80 | 68.0 | 5.62e-01 | 100.0% | 52.5% |
| 3684830 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.80 | 71.0 | 6.20e-01 | 98.5% | 67.0% |
| 3941960 | 5086.1.1.86 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YBHG | 0.80 | 67.0 | 5.48e-01 | 100.0% | 50.4% |
| 4682501 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.79 | 72.0 | 6.23e-01 | 100.0% | 68.0% |
| 4317199 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.79 | 67.0 | 5.47e-01 | 100.0% | 51.2% |
| 3974625 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.79 | 68.0 | 6.73e-01 | 100.0% | 91.4% |
| 4843090 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.77 | 70.0 | 5.83e-01 | 100.0% | 76.8% |
| 3961148 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 67.0 | 5.57e-01 | 100.0% | 63.3% |
| 4192699 | 603.5.1.1 ↗ | alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN | 0.73 | 63.0 | 5.15e-01 | 100.0% | 52.3% |
D2
medium
residues 129-185