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unnamed_protein_product

Euk-Vir

Cyprinid_herpesvirus_3

unnamed_protein_product__YP_001096171__Cyprinid_herpesvirus_3__180230

Identity

Accession:
YP_001096171 ↗
Protein ID:
unnamed_protein_product
Kingdom:
euk

Quality

50.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 70-122
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fcnA00 1.20.1220.20 Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Uncharcterised protein PF01724 0.77 65.0 4.65e-01 96.2% 34.2%
1k8kF00 3.30.1460.20 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.74 67.0 4.62e-01 100.0% 39.5%
1ax8A00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.74 51.0 3.73e-01 71.7% 29.2%
1um8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 54.0 3.51e-01 84.9% 18.3%
1q2zA00 1.25.40.240 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain 0.61 43.0 3.30e-01 71.7% 64.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3893015 5058.1.1.46 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › TSNAXIP1_N 0.81 54.0 4.92e-01 71.7% 52.9%