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unnamed_protein_product
Euk-VirCyprinid_herpesvirus_3
unnamed_protein_product__YP_001096195__Cyprinid_herpesvirus_3__180230
Identity
- Accession:
- YP_001096195 ↗
- Protein ID:
- unnamed_protein_product
- Kingdom:
- euk
Quality
62.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Alloherpesviridae›
Cyvirus›
Cyprinid_herpesvirus_3
TaxID: 180230
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-129
D2
medium
residues 151-241
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sg1X02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.72 | 46.0 | 4.96e-01 | 75.8% | 75.9% |
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.69 | 47.0 | 4.84e-01 | 75.8% | 74.1% |
| 3mhdD01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.65 | 43.0 | 4.43e-01 | 75.8% | 71.8% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.64 | 43.0 | 4.48e-01 | 79.1% | 76.5% |
| 2wiiC04 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.59 | 36.0 | 4.41e-01 | 70.3% | 100.0% |
| 3thmF00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.59 | 40.0 | 4.23e-01 | 81.3% | 83.1% |
| 2uwiA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.57 | 27.0 | 3.64e-01 | 97.8% | 90.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3852777 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.69 | 42.0 | 4.62e-01 | 70.3% | 74.7% |
| 3893267 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.66 | 40.0 | 4.85e-01 | 78.0% | 93.3% |
| 3879535 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.63 | 49.0 | 4.99e-01 | 96.7% | 85.6% |
| 3526975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.63 | 53.0 | 4.28e-01 | 95.6% | 48.0% |
| 3880888 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.55 | 47.0 | 4.75e-01 | 96.7% | 95.6% |
| 3537811 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.50 | 36.0 | 3.66e-01 | 76.9% | 75.6% |
D3
medium
residues 242-307