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uracil-DNA_glycosylase
Euk-VirHuman_alphaherpesvirus_3
uracil-DNA_glycosylase__NP_040181__Human_alphaherpesvirus_3__10335
Identity
- Accession:
- NP_040181 ↗
- Protein ID:
- uracil-DNA_glycosylase
- Kingdom:
- euk
Quality
81.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Human_alphaherpesvirus_3
TaxID: 10335
Cluster
View cluster (62 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 135-295
Domain cluster:
rep: MK016493.1__AYQ99350.1__PBI_CANTARE_130__00130__D75-228
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03167.26 best | UDG | 67.8 | 1.50e-18 | 98.8% | 97.1% |
D2
medium
residues 79-134
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2c53A00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.96 | 89.0 | 5.63e-01 | 100.0% | 24.1% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.58 | 45.0 | 3.96e-01 | 83.9% | 71.8% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 46.0 | 3.84e-01 | 92.9% | 89.1% |
| 4fvmA04 | 6.10.10.100 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.55 | 34.0 | 3.68e-01 | 87.5% | 73.9% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.53 | 41.0 | 3.12e-01 | 85.7% | 62.2% |
| 5ayvA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 42.0 | 3.44e-01 | 100.0% | 53.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3171107 | 7569.1.1.1 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG | 0.88 | 82.0 | 5.08e-01 | 100.0% | 23.8% |
| 3343787 | 109.4.1.1374 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, TPR_24 | 0.64 | 44.0 | 3.11e-01 | 71.4% | 60.6% |
| 3261307 | 109.4.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm | 0.60 | 44.0 | 2.55e-01 | 78.6% | 9.0% |