uracil-DNA_glycosylase

Euk-Vir

Canid_alphaherpesvirus_1

uracil-DNA_glycosylase__YP_009252285__Canid_alphaherpesvirus_1__170325

Identity

86.5 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Canid_alphaherpesvirus_1

TaxID: 170325

View cluster (62 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 55-116_201-212

PDB

Domain cluster: rep: uracil-DNA_glycosylase__NP_040181__Human_alphaherpesvirus_3__10335__D79-134

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2c53A00	3.40.470.10	Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain	0.98	94.0	6.34e-01	100.0%	69.3%
4uwmA00	3.20.20.30	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain	0.55	42.0	2.81e-01	86.5%	28.7%
5k7fA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.53	39.0	3.19e-01	77.0%	75.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3171107	7569.1.1.1 ↗	a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG	0.93	88.0	5.72e-01	100.0%	57.9%

D2 medium residues 117-200_213-278

PDB

Domain cluster: rep: MK016493.1__AYQ99350.1__PBI_CANTARE_130__00130__D75-228

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03167.26 best	UDG	45.9	8.80e-12	92.7%	92.1%