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v-cath

Euk-Vir

Agrotis_segetum_nucleopolyhedrovirus_B

v-cath__YP_009112582__Agrotis_segetum_nucleopolyhedrovirus_B__1580580

Identity

Accession:
YP_009112582 ↗
Protein ID:
v-cath
Kingdom:
euk

Quality

74.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 77-143
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08246.18 best Inhibitor_I29 62.4 5.70e-17 85.1% 98.3%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f75P00 1.10.287.2250 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.93 87.0 8.39e-01 100.0% 92.0%
5egwA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.88 81.0 4.93e-01 100.0% 18.2%
1xkgA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.86 68.0 4.29e-01 97.0% 18.8%
1qgtB00 1.10.4090.10 Mainly Alpha › Orthogonal Bundle › Hepatitis B viral capsid (hbcag) fold › Viral capsid, core domain supefamily, Hepatitis B virus 0.68 49.0 3.76e-01 74.6% 51.0%
4dq5B00 1.10.530.50 Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 0.68 54.0 4.03e-01 85.1% 62.5%
2l95A00 1.10.287.2250 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 54.0 5.13e-01 91.0% 82.5%
4jd9G00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.64 56.0 4.62e-01 97.0% 57.5%
1t3qA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.55 45.0 4.24e-01 98.5% 74.1%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3670045 3998.1.1.0 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 0.97 91.0 6.11e-01 97.0% 33.7%
3669025 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.97 93.0 5.87e-01 100.0% 24.5%
3680964 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.97 93.0 8.02e-01 100.0% 73.7%
3710586 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.97 93.0 8.22e-01 100.0% 74.4%
4597023 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.97 90.0 8.58e-01 97.0% 89.3%
3672258 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.96 91.0 8.11e-01 98.5% 81.8%
3580377 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.96 91.0 8.42e-01 98.5% 86.3%
3317130 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.96 92.0 8.55e-01 100.0% 90.0%
3303873 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.96 87.0 5.66e-01 94.0% 26.8%
3311566 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.96 88.0 7.95e-01 95.5% 75.3%
4429823 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.96 92.0 5.66e-01 100.0% 22.6%
3299336 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.96 91.0 5.65e-01 100.0% 23.2%
3443485 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.96 90.0 5.45e-01 98.5% 19.5%
3509928 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.95 89.0 5.29e-01 98.5% 17.0%
3299435 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.95 86.0 5.31e-01 94.0% 20.6%
3865831 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.95 87.0 5.35e-01 95.5% 20.0%
3996177 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 91.0 8.32e-01 100.0% 82.1%
None 0.95 83.0 5.16e-01 91.0% 21.3%
4127832 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.95 81.0 5.01e-01 89.6% 19.7%
4024199 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.95 87.0 5.33e-01 95.5% 20.1%
3248099 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.95 90.0 5.54e-01 100.0% 21.6%
3231548 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 89.0 8.55e-01 98.5% 89.3%
3659650 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 88.0 8.18e-01 97.0% 98.8%
3881339 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 88.0 8.64e-01 97.0% 98.6%
3319912 3998.1.1.0 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 0.95 80.0 7.46e-01 97.0% 73.8%
3383066 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 90.0 8.06e-01 100.0% 76.1%
3226089 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 89.0 8.51e-01 98.5% 94.7%
3295001 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 89.0 7.86e-01 98.5% 76.7%
4050559 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.95 90.0 8.17e-01 100.0% 82.4%
1682983 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.94 88.0 7.92e-01 98.5% 80.5%
3647682 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.94 88.0 8.19e-01 98.5% 90.0%
3253824 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.94 85.0 8.34e-01 94.0% 94.3%
3270101 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.94 76.0 8.00e-01 83.6% 95.0%
None 0.94 89.0 5.41e-01 100.0% 20.9%
1683835 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.94 88.0 7.85e-01 100.0% 77.8%
3807595 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.94 89.0 5.42e-01 100.0% 20.6%
4024684 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.94 89.0 8.28e-01 100.0% 85.0%
3929741 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.93 88.0 8.73e-01 100.0% 97.1%
3257542 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.93 88.0 8.44e-01 100.0% 90.7%
3393221 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.93 86.0 8.50e-01 98.5% 100.0%
3481568 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.93 85.0 8.43e-01 97.0% 97.1%
3496553 3998.1.1.0 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 0.93 88.0 8.67e-01 100.0% 95.7%
3498923 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.93 82.0 8.12e-01 94.0% 95.7%
3270363 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.93 86.0 8.52e-01 98.5% 95.7%
3273778 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.92 86.0 5.28e-01 98.5% 20.7%
3661135 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.92 85.0 5.26e-01 98.5% 20.3%
4589607 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.92 85.0 7.97e-01 98.5% 85.0%
4024611 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.92 85.0 5.16e-01 98.5% 19.5%
3885048 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.92 82.0 7.83e-01 94.0% 89.3%
1682900 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.92 87.0 7.42e-01 100.0% 71.7%
3274026 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.91 84.0 8.06e-01 98.5% 90.7%
4448672 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.91 78.0 4.88e-01 95.5% 19.8%
3401765 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.91 82.0 8.14e-01 97.0% 98.6%
4487940 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.91 79.0 7.77e-01 97.0% 87.1%
None 0.91 85.0 5.27e-01 100.0% 21.3%
3250149 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.91 86.0 8.06e-01 100.0% 85.9%
3470140 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.90 84.0 8.10e-01 100.0% 96.0%
3661878 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.90 85.0 7.54e-01 100.0% 95.6%
4627786 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.90 84.0 5.29e-01 98.5% 23.6%
3993671 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.90 84.0 7.87e-01 100.0% 88.7%
3930264 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.90 84.0 7.50e-01 100.0% 81.1%
2390581 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.90 84.0 7.44e-01 100.0% 72.8%
3793011 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.90 84.0 6.47e-01 100.0% 59.3%
3444957 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.89 83.0 7.99e-01 100.0% 92.0%
3795431 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.89 81.0 8.21e-01 95.5% 100.0%
3928525 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.89 80.0 7.90e-01 95.5% 97.1%
3896631 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.89 83.0 7.73e-01 100.0% 91.3%
3397014 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.88 77.0 7.84e-01 92.5% 100.0%
4268173 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.88 82.0 4.94e-01 100.0% 18.1%
3933741 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.88 81.0 7.98e-01 98.5% 100.0%
1828354 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.88 81.0 6.74e-01 100.0% 60.6%
1682959 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.88 82.0 7.04e-01 100.0% 73.7%
2076997 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.87 75.0 7.11e-01 95.5% 78.5%
3629255 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.87 80.0 5.05e-01 98.5% 22.0%
3584538 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.87 80.0 5.67e-01 98.5% 40.0%
3791026 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.86 76.0 4.74e-01 94.0% 20.9%
3998700 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.86 72.0 6.72e-01 88.1% 96.2%
3577735 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.85 77.0 7.21e-01 98.5% 90.0%
3704269 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.84 76.0 7.32e-01 100.0% 87.8%
3575739 3998.1.1.0 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 0.80 73.0 5.20e-01 100.0% 37.9%
3793229 3998.1.1.1 alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 0.80 73.0 6.84e-01 100.0% 90.0%
D2 high residues 159-381
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00112.30 best Peptidase_C1 231.3 2.10e-68 93.7% 97.7%