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v-ubiquitin

Euk-Vir

Trichoplusia_ni_granulovirus_LBIV-12

v-ubiquitin__YP_009506114__Trichoplusia_ni_granulovirus_LBIV-12__1916701

Identity

Accession:
YP_009506114 ↗
Protein ID:
v-ubiquitin
Kingdom:
euk

Quality

93.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Trichoplusia_ni_granulovirus_LBIV-12

TaxID: 1916701

Cluster

View cluster (57 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-71
PDB
Domain cluster: rep: IMGVR_UViG_3300021400_004370-3300021400-Ga0224422_126570053__D12-86
Pfam (4)
AccessionNameScoreE-valueQ covHMM cov
PF11976.15 best Rad60-SLD 62.8 2.90e-17 100.0% 98.6%
PF13881.13 Rad60-SLD_2 22.7 1.20e-04 100.0% 55.9%
PF00240.30 ubiquitin 105.8 1.10e-30 98.6% 95.8%
PF10790.16 DUF2604 25.0 2.80e-05 98.6% 78.8%