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vIRF-3
Euk-VirHuman_gammaherpesvirus_8
vIRF-3__YP_001129413__Human_gammaherpesvirus_8__37296
Identity
- Accession:
- YP_001129413 ↗
- Protein ID:
- vIRF-3
- Kingdom:
- euk
Quality
46.5
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Rhadinovirus›
Human_gammaherpesvirus_8
TaxID: 37296
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 399-562
Domain cluster:
rep: JM98__YP_238401__Macaca_fuscata_rhadinovirus__272551__D238-410
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dshA01 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.84 | 80.0 | 7.37e-01 | 100.0% | 86.1% |
| 5bviA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.82 | 77.0 | 7.38e-01 | 100.0% | 87.4% |
| 1r21A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.81 | 47.0 | 6.01e-01 | 98.8% | 96.0% |
| 1zoqA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.80 | 77.0 | 7.24e-01 | 100.0% | 88.5% |
| 1uhtA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.79 | 49.0 | 5.78e-01 | 100.0% | 86.4% |
| 1gxcA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.79 | 54.0 | 6.37e-01 | 100.0% | 97.4% |
| 7cd1D01 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.79 | 75.0 | 7.31e-01 | 98.2% | 92.6% |
| 5e50A01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.79 | 48.0 | 6.04e-01 | 98.8% | 99.0% |
| 2lc1A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.78 | 45.0 | 5.60e-01 | 98.8% | 92.0% |
| 4r9pA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.78 | 75.0 | 6.76e-01 | 100.0% | 81.4% |
| 2kb3A01 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.77 | 45.0 | 5.20e-01 | 98.8% | 78.3% |
| 4a4yA01 | 2.60.200.50 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.75 | 43.0 | 5.54e-01 | 99.4% | 95.9% |
| 2g1lA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.74 | 46.0 | 5.67e-01 | 98.2% | 98.1% |
| 3hx1B00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.73 | 46.0 | 5.70e-01 | 99.4% | 99.1% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.68 | 42.0 | 5.19e-01 | 100.0% | 97.2% |
| 3d33A00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 37.0 | 4.66e-01 | 100.0% | 96.8% |
| 1l4iB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 29.0 | 3.96e-01 | 79.9% | 100.0% |
| 1ok0A00 | 2.60.40.20 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-amylase inhibitor | 0.57 | 28.0 | 3.95e-01 | 87.2% | 100.0% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.53 | 32.0 | 3.88e-01 | 100.0% | 88.5% |
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.52 | 48.0 | 4.36e-01 | 100.0% | 96.4% |
| 5f1mA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.52 | 48.0 | 4.11e-01 | 100.0% | 96.1% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 47.0 | 3.88e-01 | 100.0% | 100.0% |
| 1sznA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 32.0 | 3.94e-01 | 89.6% | 100.0% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 3.03e-01 | 71.3% | 96.2% |
| 4iikA00 | 3.60.40.20 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › | 0.51 | 47.0 | 3.82e-01 | 100.0% | 95.4% |
| 6jkvA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 47.0 | 4.18e-01 | 100.0% | 97.8% |
| 2e6jA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 33.0 | 3.90e-01 | 84.8% | 95.5% |
| 3w42A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.50 | 46.0 | 4.32e-01 | 100.0% | 95.5% |
| 3zt9A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.50 | 45.0 | 4.29e-01 | 97.6% | 99.0% |
| 2p8eA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.50 | 46.0 | 3.85e-01 | 100.0% | 93.5% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3912381 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.89 | 86.0 | 7.61e-01 | 100.0% | 76.4% |
| 3914798 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.86 | 82.0 | 7.59e-01 | 100.0% | 87.5% |
| 3476756 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.85 | 51.0 | 6.37e-01 | 99.4% | 93.3% |
| 4201724 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.84 | 49.0 | 6.38e-01 | 97.6% | 98.9% |
| 3937000 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.84 | 80.0 | 7.16e-01 | 100.0% | 87.6% |
| 169139 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.84 | 80.0 | 6.93e-01 | 100.0% | 73.7% |
| 3472775 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.83 | 51.0 | 6.33e-01 | 100.0% | 95.2% |
| 3759744 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.83 | 59.0 | 6.89e-01 | 79.3% | 98.3% |
| 3470623 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.83 | 80.0 | 7.42e-01 | 100.0% | 83.0% |
| 3887924 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.82 | 79.0 | 7.20e-01 | 100.0% | 83.9% |
| 3899206 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.82 | 79.0 | 7.23e-01 | 100.0% | 80.0% |
| 3796291 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.82 | 74.0 | 6.85e-01 | 100.0% | 77.9% |
| 3797402 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.82 | 73.0 | 6.85e-01 | 100.0% | 77.9% |
| 3895000 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.81 | 78.0 | 7.22e-01 | 100.0% | 84.8% |
| 3772155 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.81 | 78.0 | 6.89e-01 | 100.0% | 75.6% |
| 3490466 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.81 | 61.0 | 6.79e-01 | 77.4% | 95.6% |
| 3621193 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.81 | 52.0 | 6.28e-01 | 97.6% | 96.4% |
| 3923208 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.81 | 78.0 | 6.78e-01 | 100.0% | 87.0% |
| 3216688 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.81 | 78.0 | 6.78e-01 | 100.0% | 87.8% |
| 3912511 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.81 | 77.0 | 7.06e-01 | 100.0% | 83.9% |
| 3234709 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.80 | 77.0 | 6.99e-01 | 100.0% | 83.7% |
| 3990716 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.80 | 72.0 | 7.02e-01 | 100.0% | 86.9% |
| 3933647 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.80 | 77.0 | 7.11e-01 | 100.0% | 85.0% |
| 3588290 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.80 | 28.0 | 5.01e-01 | 73.8% | 98.2% |
| 3738478 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.80 | 49.0 | 6.20e-01 | 97.0% | 100.0% |
| 3270361 | 73.1.1.9 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA_2 | 0.80 | 51.0 | 6.10e-01 | 99.4% | 94.5% |
| 2722184 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.79 | 76.0 | 7.36e-01 | 100.0% | 91.7% |
| 3999204 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.79 | 76.0 | 7.10e-01 | 100.0% | 87.7% |
| 2142307 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.79 | 73.0 | 6.88e-01 | 100.0% | 82.5% |
| 376846 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.79 | 54.0 | 6.24e-01 | 100.0% | 94.2% |
| 3247678 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.79 | 75.0 | 7.05e-01 | 100.0% | 90.3% |
| 3552204 | 73.1.1.9 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA_2 | 0.79 | 49.0 | 5.73e-01 | 100.0% | 87.8% |
| 4951173 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.79 | 55.0 | 6.23e-01 | 100.0% | 92.8% |
| 3933148 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.78 | 75.0 | 6.76e-01 | 100.0% | 76.7% |
| 3939212 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.78 | 75.0 | 6.64e-01 | 100.0% | 80.3% |
| 3409563 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.78 | 75.0 | 6.74e-01 | 100.0% | 79.9% |
| 3974706 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.78 | 49.0 | 6.04e-01 | 98.2% | 98.1% |
| 3408201 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.78 | 74.0 | 6.68e-01 | 100.0% | 79.1% |
| 2069 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.78 | 74.0 | 6.40e-01 | 100.0% | 70.7% |
| 3282420 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.76 | 49.0 | 5.59e-01 | 100.0% | 85.6% |
| 3180498 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.73 | 39.0 | 5.28e-01 | 87.2% | 97.8% |
| 3291725 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.71 | 46.0 | 5.49e-01 | 100.0% | 93.0% |
| 3592884 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.71 | 53.0 | 5.98e-01 | 100.0% | 99.2% |
| 3664663 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.70 | 49.0 | 5.74e-01 | 97.0% | 100.0% |
| 3709505 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.70 | 52.0 | 5.89e-01 | 97.6% | 99.2% |
| 3784361 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.69 | 48.0 | 5.66e-01 | 92.7% | 100.0% |
| 5055377 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.67 | 50.0 | 5.65e-01 | 98.8% | 98.4% |
| 4027310 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.62 | 47.0 | 5.24e-01 | 100.0% | 97.7% |
| 4677520 | 701.1.1.1 ↗ | beta sandwiches › alpha-Amylase inhibitor tendamistat › alpha-Amylase inhibitor tendamistat › alpha-Amylase inhibitor tendamistat › A_amylase_inhib | 0.58 | 28.0 | 4.03e-01 | 84.1% | 98.7% |
| 1057 | 701.1.1.1 ↗ | beta sandwiches › alpha-Amylase inhibitor tendamistat › alpha-Amylase inhibitor tendamistat › alpha-Amylase inhibitor tendamistat › A_amylase_inhib | 0.57 | 28.0 | 3.95e-01 | 86.0% | 100.0% |
| 3300599 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.53 | 48.0 | 3.86e-01 | 100.0% | 91.7% |
| None | — | 0.53 | 48.0 | 4.19e-01 | 100.0% | 98.0% | |
| 3264730 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 48.0 | 3.97e-01 | 98.2% | 98.6% |
| 2822348 | 10.13.1.1 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase | 0.52 | 27.0 | 3.64e-01 | 92.1% | 96.4% |
| 2521871 | 210.2.1.3 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 | 0.52 | 48.0 | 4.11e-01 | 100.0% | 94.9% |
| 3593621 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.52 | 34.0 | 3.88e-01 | 76.2% | 89.2% |
| 3666346 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 48.0 | 3.68e-01 | 100.0% | 95.1% |
| 3252054 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.51 | 47.0 | 3.90e-01 | 100.0% | 97.6% |
| 3305193 | 210.2.1.3 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 | 0.51 | 47.0 | 4.04e-01 | 100.0% | 95.7% |
| 5025780 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.51 | 47.0 | 4.17e-01 | 100.0% | 99.6% |
| None | — | 0.51 | 47.0 | 4.05e-01 | 100.0% | 98.0% | |
| 4001015 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.51 | 46.0 | 3.94e-01 | 100.0% | 99.6% |
| 3233246 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.50 | 45.0 | 3.87e-01 | 100.0% | 97.0% |
D2
medium
residues 6-79