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viral_inclusion_body_protein
Euk-VirChobar_Gorge_virus
viral_inclusion_body_protein__YP_009158908__Chobar_Gorge_virus__1679172
Identity
- Accession:
- YP_009158908 ↗
- Protein ID:
- viral_inclusion_body_protein
- Kingdom:
- euk
Quality
78.3
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-126
Domain cluster:
rep: viral_inclusion_body_protein__YP_009158888__Wad_Medani_virus__40067__D17-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04514.20 best | BTV_NS2 | 165.6 | 3.40e-48 | 100.0% | 30.8% |
D2
high
residues 283-365
Domain cluster:
rep: single-stranded_RNA-binding_protein__YP_009551618__Guangxi_orbivirus__2306813__D349-434
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04514.20 best | BTV_NS2 | 55.9 | 7.30e-15 | 100.0% | 21.4% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rvkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 29.0 | 2.62e-01 | 77.1% | 34.5% |
| 2yq2A02 | 2.60.40.3000 | Mainly Beta › Sandwich › Immunoglobulin-like › Pestivirus envelope glycoprotein E2, domain B | 0.51 | 36.0 | 3.78e-01 | 74.7% | 96.1% |
| 3vsjD00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.51 | 39.0 | 2.76e-01 | 84.3% | 70.2% |
| 1c0aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 44.0 | 3.04e-01 | 100.0% | 77.4% |
| 6nrzA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 44.0 | 2.95e-01 | 100.0% | 87.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4331415 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.55 | 36.0 | 2.42e-01 | 100.0% | 17.5% |
| 4160081 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.54 | 36.0 | 2.43e-01 | 100.0% | 16.7% |
| 4534043 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.54 | 35.0 | 2.39e-01 | 100.0% | 16.7% |
| 5072381 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.54 | 36.0 | 2.40e-01 | 100.0% | 17.0% |
| None | — | 0.53 | 35.0 | 2.38e-01 | 100.0% | 17.5% | |
| 3410270 | 11.1.1.605 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_9th | 0.52 | 37.0 | 3.82e-01 | 74.7% | 95.0% |
| 3701641 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 43.0 | 3.10e-01 | 94.0% | 72.3% |
| 3757867 | 211.1.1.26 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › zf-3CxxC | 0.51 | 44.0 | 3.93e-01 | 100.0% | 68.8% |
| 3486033 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.51 | 43.0 | 2.87e-01 | 100.0% | 83.5% |