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viral_polypeptide_VP1

Euk-Vir

Diatraea_saccharalis_densovirus

viral_polypeptide_VP1__NP_046815__Diatraea_saccharalis_densovirus__72003

Identity

Accession:
NP_046815 ↗
Protein ID:
viral_polypeptide_VP1
Kingdom:
euk

Quality

53.4 mean pLDDT

Taxonomy

Shotokuvirae› Cossaviricota› Quintoviricetes› Piccovirales› Parvoviridae› Diatraea_saccharalis_densovirus

TaxID: 72003

Cluster

View cluster (10 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 175-287
PDB
D2 medium residues 1-31_76-103
PDB
D3 medium residues 104-174
PDB
D4 medium residues 407-417_458-484_613-641_689-718_739-768
PDB
Domain cluster: rep: viral_polypeptide_VP3__NP_046817__Diatraea_saccharalis_densovirus__72003__D84-100_130-164_296-322_423-447
D5 medium residues 418-457_503-612_719-738
PDB
Domain cluster: rep: viral_polypeptide_VP4__NP_046818__Diatraea_saccharalis_densovirus__72003__D35-143_249-273_312-405
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02336.22 best Denso_VP4 87.7 1.40e-24 67.7% 38.3%