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viral_sRNA_NS_protein

Euk-Vir

Sandfly_fever_Naples_virus

viral_sRNA_NS_protein__YP_089667__Sandfly_fever_Naples_virus__206160

Identity

Accession:: YP_089667 ↗
Protein ID:: viral_sRNA_NS_protein
Kingdom:: euk

Quality

72.1 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Bunyaviricetes› Hareavirales› Phenuiviridae› Phlebovirus› Sandfly_fever_Naples_virus

TaxID: 206160

Cluster

View cluster (55 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-82

PDB

Domain cluster: rep: nonstructural_protein__YP_009346037__Uriurana_virus__1055750__D4-72

D2 medium residues 83-234

PDB

Domain cluster: rep: nonstructural_protein__YP_009141016__Bhanja_virus__1213620__D62-228

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1nubA02	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.61	40.0	4.14e-01	99.3%	69.4%
6ko5A02	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.59	49.0	4.01e-01	90.8%	97.9%
3oioA00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.54	32.0	3.64e-01	79.6%	77.7%
5wp3B00	1.10.132.20	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor	0.54	28.0	3.37e-01	91.4%	73.5%
3kyiA00	1.20.120.160	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain	0.53	32.0	3.44e-01	84.9%	70.3%
1x46A00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.53	38.0	3.89e-01	75.0%	90.0%
1u89A00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.52	33.0	3.42e-01	95.4%	66.9%
3f2eA00	1.20.58.800	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.51	27.0	3.56e-01	79.6%	92.8%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4822198	1183.1.1.1 ↗	alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs	0.88	73.0	7.87e-01	93.4%	100.0%
2323915	1183.1.1.1 ↗	alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs	0.82	77.0	7.50e-01	100.0%	91.0%
3249252	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.65	53.0	4.16e-01	88.2%	94.2%
3791888	5001.1.1.5 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3	0.63	55.0	4.20e-01	95.4%	74.9%
3925630	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.61	51.0	4.01e-01	90.8%	90.9%
None	—		0.60	50.0	3.92e-01	90.8%	86.2%
None	—		0.60	48.0	3.80e-01	85.5%	86.8%
3937791	633.10.1.18 ↗	alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › THU_Piezo1	0.55	30.0	3.56e-01	95.4%	78.0%
3744870	109.4.1.62 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nic96	0.54	38.0	3.29e-01	71.7%	58.3%
3962079	633.6.1.12 ↗	alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX+ACOX_C_alpha1	0.50	44.0	3.57e-01	96.7%	79.3%