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viral_sRNA_Nonstructural_protein
Euk-VirToros_virus
viral_sRNA_Nonstructural_protein__YP_009480528__Toros_virus__1764085
Identity
- Accession:
- YP_009480528 ↗
- Protein ID:
- viral_sRNA_Nonstructural_protein
- Kingdom:
- euk
Quality
81.3
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Bunyaviricetes›
Hareavirales›
Phenuiviridae›
Phlebovirus›
Toros_virus
TaxID: 1764085
Cluster
View cluster (55 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-86_139-164
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2a7rD00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 41.0 | 3.02e-01 | 84.8% | 90.9% |
D2
medium
residues 87-138_165-242
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ifsB02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.58 | 32.0 | 4.17e-01 | 70.0% | 100.0% |
| 1u7gA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.56 | 41.0 | 2.97e-01 | 76.2% | 59.5% |
| 2v0cA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.54 | 40.0 | 3.77e-01 | 76.9% | 96.9% |
| 2dbgA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 36.0 | 3.97e-01 | 100.0% | 86.4% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 47.0 | 4.63e-01 | 97.7% | 93.5% |
| 4o6yB00 | 1.20.120.1770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 40.0 | 3.46e-01 | 81.5% | 89.6% |
| 2x1lA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.52 | 41.0 | 3.74e-01 | 83.8% | 90.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2323915 | 1183.1.1.1 ↗ | alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs | 0.92 | 83.0 | 7.46e-01 | 92.3% | 91.0% |
| 4822198 | 1183.1.1.1 ↗ | alpha complex topology › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › Rift Valley fever virus non-structural protein NS-S › NSs | 0.89 | 74.0 | 7.52e-01 | 85.4% | 100.0% |
| 3728650 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 34.0 | 4.31e-01 | 83.1% | 100.0% |
| None | — | 0.54 | 40.0 | 3.57e-01 | 76.9% | 95.1% | |
| None | — | 0.54 | 41.0 | 3.57e-01 | 78.5% | 93.8% | |
| 5060868 | 140.1.1.9 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_3 | 0.54 | 42.0 | 3.88e-01 | 83.1% | 89.4% |
| 3741603 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.52 | 34.0 | 3.50e-01 | 83.1% | 68.0% |
| 3816910 | 174.1.1.58 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NEPRO_N | 0.52 | 46.0 | 4.05e-01 | 96.9% | 92.6% |
| 4217301 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.52 | 42.0 | 3.59e-01 | 86.9% | 85.9% |
| 4955584 | 187.1.1.4 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_17 | 0.51 | 36.0 | 3.74e-01 | 94.6% | 80.0% |
| 3388223 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.51 | 35.0 | 3.64e-01 | 77.7% | 75.0% |
| 3252095 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.51 | 43.0 | 3.73e-01 | 94.6% | 83.3% |
| 5008400 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 39.0 | 3.22e-01 | 82.3% | 95.2% |
| 3671050 | 6155.1.1.5 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › ER_lumen_recept | 0.51 | 44.0 | 4.04e-01 | 96.2% | 97.1% |
| 4204476 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.50 | 38.0 | 3.21e-01 | 79.2% | 84.0% |