virion_protein_UL87

Euk-Vir

Wood_mouse_herpesvirus

virion_protein_UL87__YP_010085899__Wood_mouse_herpesvirus__432370

Identity

69.8 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Rhadinovirus› Wood_mouse_herpesvirus

TaxID: 432370

View cluster (22 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 206-332

PDB

Domain cluster: rep: ORF16__NP_733869__Callitrichine_gammaherpesvirus_3__106331__D190-345

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03043.21 best	Herpes_UL87	68.3	7.50e-19	100.0%	24.3%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l48A00	3.30.70.2030	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.54	32.0	3.74e-01	94.5%	85.9%
5m99A02	3.90.400.10	Alpha Beta › Alpha-Beta Complex › Oligo-1,6-glucosidase; domain 2 › Oligo-1,6-glucosidase; Domain 2	0.51	26.0	3.45e-01	80.3%	93.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5011597	101.1.2.143 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_34	0.50	34.0	3.74e-01	83.5%	87.9%

D2 medium residues 1-19_68-113

PDB

Domain cluster: rep: ORF24__YP_001129377__Human_gammaherpesvirus_8__37296__D7-20_78-121

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3hm2A00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.55	42.0	3.22e-01	87.7%	95.9%
2dirA01	3.30.2300.10	Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily	0.51	39.0	3.66e-01	89.2%	93.1%

D3 medium residues 20-67_114-202

PDB

Domain cluster: rep: hypothetical_protein__YP_009551834__Rhinolophus_gammaherpesvirus_1__2054179__D30-81_138-219

D4 medium residues 394-428_441-582

PDB