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virion_protein_US2
Euk-VirAteline_alphaherpesvirus_1
virion_protein_US2__YP_009361941__Ateline_alphaherpesvirus_1__35243
Identity
- Accession:
- YP_009361941 ↗
- Protein ID:
- virion_protein_US2
- Kingdom:
- euk
Quality
74.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Simplexvirus›
Ateline_alphaherpesvirus_1
TaxID: 35243
Cluster
View cluster (29 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-193
Domain cluster:
rep: virion_protein_US2__YP_009042123__Fruit_bat_alphaherpesvirus_1__1343901__D3-201
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02476.22 best | US2 | 229.2 | 4.30e-68 | 100.0% | 99.0% |
D2
medium
residues 196-231
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bm1A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.79 | 63.0 | 4.06e-01 | 94.4% | 19.8% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.70 | 60.0 | 5.50e-01 | 100.0% | 91.8% |
| 4fzwA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.67 | 47.0 | 4.35e-01 | 88.9% | 56.9% |