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virion_release_protein

Euk-Vir

Turkeypox_virus

virion_release_protein__YP_009177100__Turkeypox_virus__336486

Identity

Accession:
YP_009177100 ↗
Protein ID:
virion_release_protein
Kingdom:
euk

Quality

74.7 mean pLDDT

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-199
PDB
Domain cluster: rep: eev_maturation_protein__YP_009268735__Pteropox_virus__1873698__D87-208
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03337.20 best Pox_F12L 57.5 1.10e-15 95.8% 16.3%
D2 high residues 214-399
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03337.20 best Pox_F12L 75.6 3.70e-21 99.5% 23.7%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d5aA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.74 69.0 6.54e-01 99.5% 97.7%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 60.0 5.85e-01 95.7% 100.0%
1wljA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 57.0 6.00e-01 94.6% 100.0%
3bzcA03 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.63 43.0 5.02e-01 95.2% 100.0%
3fkfD00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 32.0 3.65e-01 88.2% 67.2%
6p0wA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 33.0 3.81e-01 92.5% 72.6%
3drnB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 33.0 3.62e-01 93.0% 66.0%
3gl3D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 31.0 3.53e-01 89.2% 67.9%
4ktwA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 46.0 4.98e-01 88.7% 100.0%
3shqA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 39.0 3.68e-01 92.5% 59.2%
1t6cA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 37.0 4.39e-01 94.1% 99.2%
3u3gA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 40.0 4.57e-01 79.0% 100.0%
3mdqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 36.0 4.29e-01 90.3% 98.4%
2k6vA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 34.0 3.56e-01 89.2% 66.3%
3vrhA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 41.0 3.46e-01 79.0% 60.7%
2qkbA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 40.0 4.41e-01 78.5% 98.0%
6vloD01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 33.0 3.23e-01 96.2% 54.8%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.52 44.0 4.10e-01 89.2% 89.0%
1on4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 37.0 3.87e-01 84.9% 79.9%
1ivyB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 45.0 3.41e-01 97.8% 89.6%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3951189 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.79 73.0 6.73e-01 97.3% 91.3%
4261005 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.78 74.0 6.45e-01 100.0% 90.9%
3936953 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.73 67.0 5.61e-01 96.8% 71.2%
3922908 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.71 64.0 5.96e-01 96.2% 80.9%
3798192 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.68 62.0 5.77e-01 96.2% 78.3%
3997031 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.68 62.0 5.81e-01 96.2% 80.0%
3682884 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.66 61.0 5.69e-01 97.8% 84.9%
5058066 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.64 40.0 4.93e-01 95.2% 100.0%
4497431 2484.1.1.38 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 0.64 42.0 5.10e-01 96.8% 100.0%
3943513 2484.1.1.74 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tex_YqgF 0.63 44.0 4.84e-01 89.8% 87.3%
3838769 7512.1.1.7 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_9 0.60 36.0 3.84e-01 91.4% 66.9%
3434599 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.60 41.0 3.61e-01 97.8% 46.5%
3712058 2484.1.1.72 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF 0.59 44.0 4.72e-01 91.4% 89.4%
3597605 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 46.0 4.76e-01 95.7% 88.2%
4280777 4335.1.1.1 ↗ a/b three-layered sandwiches › Nqo1 FMN-binding domain-like › Nqo1 FMN-binding domain-like › Nqo1 FMN-binding domain-like › Complex1_51K 0.57 35.0 3.38e-01 96.8% 53.2%
3830251 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.57 47.0 4.95e-01 94.1% 97.6%
3940112 2484.5.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.56 36.0 4.40e-01 86.0% 100.0%
3924864 2484.5.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.56 37.0 4.40e-01 90.3% 96.2%
3930501 2484.5.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase 0.56 37.0 4.38e-01 84.9% 97.6%
3686290 2484.1.1.4 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.55 43.0 4.12e-01 80.6% 95.2%
3934889 2484.5.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.55 36.0 4.30e-01 83.9% 98.4%
3272155 247.1.1.30 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 0.54 40.0 2.77e-01 76.3% 87.6%
3604378 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.54 40.0 3.59e-01 76.9% 69.1%
None — 0.54 41.0 3.73e-01 78.0% 75.1%
5008723 2484.1.1.66 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.54 46.0 4.76e-01 97.8% 98.3%
3926560 2484.1.1.212 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH 0.54 37.0 4.27e-01 77.4% 97.0%
3947532 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.53 32.0 3.87e-01 90.3% 92.5%
5017867 2484.1.1.66 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 0.52 44.0 4.64e-01 96.8% 100.0%
1187396 2004.1.1.117 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.52 37.0 3.49e-01 73.1% 70.3%
3986759 2004.1.1.117 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.52 37.0 3.57e-01 73.1% 75.8%
4293297 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.50 36.0 4.18e-01 91.4% 100.0%
4512151 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.50 34.0 4.04e-01 95.2% 97.7%
D3 medium residues 1-75
PDB
D4 medium residues 400-469_543-625
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q8iA04 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.65 45.0 4.02e-01 100.0% 51.2%
2py5A02 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.64 46.0 4.35e-01 100.0% 62.6%
1d5aA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.58 46.0 4.54e-01 88.9% 78.0%
1s5jA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.55 38.0 3.81e-01 76.5% 68.2%
3qexA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.54 44.0 3.80e-01 86.9% 59.7%
3gwlA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.50 23.0 2.77e-01 74.5% 62.3%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4651639 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.73 67.0 5.04e-01 100.0% 70.0%
4983223 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.71 61.0 5.14e-01 90.8% 77.6%
3801150 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.70 57.0 4.54e-01 85.6% 63.4%
4944522 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.69 56.0 4.74e-01 85.0% 69.4%
3506687 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.69 63.0 4.57e-01 100.0% 68.4%
4959101 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.69 59.0 5.04e-01 91.5% 75.5%
4932480 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.68 53.0 4.72e-01 81.7% 73.6%
3464384 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.68 62.0 5.25e-01 99.3% 76.9%
4970593 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.68 62.0 5.28e-01 99.3% 80.0%
4029141 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.68 55.0 4.59e-01 85.0% 69.6%
4997717 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.68 62.0 4.93e-01 100.0% 72.3%
3993981 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.68 53.0 4.62e-01 81.0% 72.4%
4674811 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.67 57.0 4.42e-01 90.2% 64.9%
3705562 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.67 61.0 4.03e-01 100.0% 74.7%
3597965 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.67 52.0 4.45e-01 81.0% 73.1%
5041308 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.67 55.0 4.57e-01 86.9% 65.6%
3831499 304.48.1.63 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B, DUF1744 0.67 61.0 3.94e-01 100.0% 28.0%
4978605 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.67 61.0 4.97e-01 99.3% 71.6%
4956224 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.67 58.0 5.04e-01 93.5% 79.6%
5076614 2484.1.1.328 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B 0.67 61.0 4.05e-01 100.0% 74.6%
3266689 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.67 61.0 5.10e-01 99.3% 80.8%
3705695 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.67 60.0 5.17e-01 99.3% 69.4%
5017083 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.67 60.0 5.01e-01 99.3% 77.4%
3474156 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.67 61.0 4.99e-01 99.3% 76.7%
3615419 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.66 60.0 4.71e-01 100.0% 78.5%
5025843 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.66 56.0 5.07e-01 91.5% 73.8%
4977369 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.66 60.0 5.12e-01 100.0% 80.0%
4942685 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.66 60.0 4.24e-01 100.0% 42.7%
4419306 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.66 56.0 5.03e-01 90.8% 75.7%
5028548 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.66 60.0 5.01e-01 100.0% 82.3%
3924217 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.66 60.0 5.01e-01 99.3% 81.9%
4144335 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.66 60.0 5.01e-01 99.3% 79.6%
3684974 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.66 59.0 3.92e-01 100.0% 74.8%
4629102 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.65 48.0 3.42e-01 100.0% 25.4%
3784383 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.65 59.0 4.46e-01 99.3% 62.4%
4958554 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.65 53.0 4.56e-01 85.6% 74.0%
3317444 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.65 59.0 4.20e-01 100.0% 78.1%
5000652 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.65 46.0 4.41e-01 73.2% 70.0%
3578106 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.65 59.0 4.85e-01 99.3% 77.1%
3741560 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.65 58.0 4.86e-01 99.3% 74.1%
3797416 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.65 58.0 4.87e-01 99.3% 77.8%
3508610 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.65 58.0 4.95e-01 99.3% 81.6%
3189629 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.65 59.0 4.12e-01 99.3% 41.9%
3206807 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.65 59.0 4.88e-01 100.0% 75.6%
3877126 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.65 59.0 3.83e-01 99.3% 31.2%
4022145 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.64 59.0 3.90e-01 100.0% 32.4%
4461958 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.64 58.0 5.01e-01 99.3% 77.5%
3471267 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.64 58.0 4.02e-01 99.3% 80.2%
3968795 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.64 58.0 4.83e-01 100.0% 68.9%
3349591 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.64 58.0 4.71e-01 100.0% 75.5%
4981193 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.64 58.0 4.91e-01 100.0% 75.7%
3466667 2484.1.1.161 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 57.0 3.80e-01 100.0% 30.2%
4629010 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.63 57.0 5.02e-01 99.3% 76.9%
4935885 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.63 57.0 4.43e-01 100.0% 80.6%
4276636 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.63 57.0 4.45e-01 100.0% 75.2%
4990174 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.62 55.0 4.87e-01 98.7% 76.5%
5044377 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.62 57.0 4.84e-01 100.0% 75.1%
5012084 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.61 57.0 4.96e-01 100.0% 76.9%
5025209 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.61 52.0 4.51e-01 91.5% 73.2%
4182409 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.61 39.0 3.93e-01 85.6% 61.9%
4982660 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.61 52.0 4.61e-01 90.8% 75.3%
5073476 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.61 56.0 4.84e-01 100.0% 71.1%
4939489 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.61 45.0 4.11e-01 88.9% 59.5%
4264107 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.56 52.0 4.13e-01 100.0% 68.3%
3381141 304.48.1.24 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 0.54 39.0 3.83e-01 85.0% 68.2%
D5 medium residues 470-542
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03337.20 best Pox_F12L 78.3 5.40e-22 100.0% 11.1%
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2py5A03 3.30.1770.10 Alpha Beta › 2-Layer Sandwich › TPR 1 domain of DNA polymerase › TPR 1 domain of DNA polymerase 0.75 68.0 6.34e-01 100.0% 90.1%
4it4E01 2.40.30.320 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 50.0 4.39e-01 89.0% 78.1%
4fsdA02 3.40.5.100 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.60 45.0 4.32e-01 80.8% 69.8%
2e9xD02 3.40.5.60 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.60 41.0 4.43e-01 71.2% 100.0%
3bv8A00 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.59 48.0 4.65e-01 95.9% 80.0%
6rawN02 3.40.5.60 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.59 41.0 4.52e-01 75.3% 100.0%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 48.0 3.85e-01 91.8% 96.6%
5ocqA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 3.38e-01 97.3% 94.5%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 3.79e-01 90.4% 89.7%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 44.0 4.12e-01 87.7% 91.6%
3anwA02 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.56 40.0 4.42e-01 87.7% 96.6%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 43.0 3.70e-01 84.9% 73.0%
7mjrA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 44.0 3.73e-01 89.0% 97.7%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 3.55e-01 98.6% 93.1%
7zubC01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 44.0 3.62e-01 87.7% 85.5%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 3.69e-01 100.0% 96.4%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.90e-01 97.3% 95.1%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 3.68e-01 94.5% 96.2%
4ca9A00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.53 45.0 4.16e-01 98.6% 94.9%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.23e-01 100.0% 77.3%
4bz4A00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.53 40.0 3.03e-01 84.9% 96.0%
6v46A02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.52 36.0 2.67e-01 74.0% 60.1%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.52 43.0 3.32e-01 98.6% 75.8%
2xueA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.51 42.0 2.86e-01 90.4% 28.8%
4d7yA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.51e-01 94.5% 96.9%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 41.0 3.30e-01 93.2% 96.9%
5b8iC00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 41.0 3.54e-01 90.4% 89.9%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.17e-01 93.2% 96.1%
1nziA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.50 38.0 3.35e-01 83.6% 100.0%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4651639 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.86 80.0 4.97e-01 100.0% 23.9%
4060951 4968.1.1.1 ↗ a+b complex topology › insertion domain in bacteriophage phi29 DNA polymerase › insertion domain in bacteriophage phi29 DNA polymerase › insertion domain in bacteriophage phi29 DNA polymerase › DNA_pol_B_2 0.82 75.0 7.13e-01 100.0% 95.3%
3582651 4968.1.1.0 ↗ a+b complex topology › insertion domain in bacteriophage phi29 DNA polymerase › insertion domain in bacteriophage phi29 DNA polymerase › insertion domain in bacteriophage phi29 DNA polymerase 0.80 72.0 7.03e-01 100.0% 96.2%
3818732 4076.3.1.9 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PSF1_C 0.63 45.0 5.03e-01 75.3% 100.0%
5007943 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 42.0 4.31e-01 74.0% 88.6%
3592285 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.56 40.0 3.06e-01 76.7% 84.6%
4660646 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.55 47.0 3.37e-01 100.0% 66.9%
3824965 10.32.1.198 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 0.55 44.0 3.50e-01 94.5% 90.8%
5039694 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 47.0 3.71e-01 100.0% 96.4%
3624262 101.1.2.115 ↗ alpha arrays › HTH › HTH › winged helix domain › CDC27 0.54 46.0 3.76e-01 100.0% 64.7%
3788123 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.54 42.0 3.30e-01 84.9% 54.8%
3592387 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 41.0 3.06e-01 86.3% 100.0%
3949140 7523.1.1.15 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.52 41.0 3.51e-01 86.3% 94.2%
3939665 11.1.1.208 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HECW_N 0.52 38.0 3.52e-01 79.5% 94.0%
3701549 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.52 39.0 3.24e-01 83.6% 53.8%
3600305 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.52 40.0 3.30e-01 84.9% 53.6%
4011054 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 40.0 3.43e-01 86.3% 100.0%
3740598 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.49e-01 98.6% 63.2%
3896769 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.52 43.0 3.34e-01 98.6% 85.4%
4530175 10.32.1.23 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Bac_rhamnosid 0.51 42.0 3.54e-01 97.3% 95.7%
3889463 10.32.1.225 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 0.51 39.0 3.20e-01 87.7% 89.7%
3558842 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.51 43.0 3.11e-01 100.0% 69.0%
3741738 10.2.1.55 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.50 42.0 3.66e-01 100.0% 98.4%
3882832 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 38.0 3.17e-01 82.2% 80.0%