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virion_transmembrane_glycoprotein_G
Euk-VirTibrogargan_virus
virion_transmembrane_glycoprotein_G__YP_007641373__Tibrogargan_virus__318844
Identity
- Accession:
- YP_007641373 ↗
- Protein ID:
- virion_transmembrane_glycoprotein_G
- Kingdom:
- euk
Quality
62.9
mean pLDDT
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-35_357-524
D2
high
residues 62-71_204-310
D3
high
residues 76-201
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 114.8 | 3.70e-33 | 79.4% | 99.0% |
D4
medium
residues 36-59_327-356
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b5dX02 | 1.20.1430.10 | Mainly Alpha › Up-down Bundle › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase, middle domain | 0.66 | 54.0 | 4.27e-01 | 90.7% | 74.6% |
| 3lxuX03 | 6.10.250.3080 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 43.0 | 4.17e-01 | 85.2% | 74.2% |
| 3bqwA01 | 3.15.30.10 | Alpha Beta › Super Roll › putative capsid protein of prophage fold › putative capsid protein of prophage domain like | 0.53 | 49.0 | 3.18e-01 | 100.0% | 74.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4625631 | 4957.1.1.1 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit › RNA_pol_Rpb1_6 | 0.64 | 55.0 | 3.76e-01 | 94.4% | 73.2% |
| 3288004 | 3236.2.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › 2HCT | 0.63 | 49.0 | 2.94e-01 | 87.0% | 66.2% |
| 5028684 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.59 | 44.0 | 3.28e-01 | 79.6% | 80.0% |
| 3693975 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.57 | 47.0 | 3.54e-01 | 90.7% | 37.7% |
| 3728098 | 230.5.1.1 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 | 0.57 | 46.0 | 3.36e-01 | 90.7% | 73.3% |