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virion_transmembrane_glycoprotein_G
Euk-VirCoastal_Plains_virus
virion_transmembrane_glycoprotein_G__YP_009094410__Coastal_Plains_virus__764599
Identity
- Accession:
- YP_009094410 ↗
- Protein ID:
- virion_transmembrane_glycoprotein_G
- Kingdom:
- euk
Quality
66.7
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Tibrovirus›
Coastal_Plains_virus
TaxID: 764599
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 61-71_203-316
Domain cluster:
rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294
D2
high
residues 78-201
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 111.8 | 3.20e-32 | 79.0% | 98.0% |
D3
medium
residues 22-59_317-391_513-521
Domain cluster:
rep: glycoprotein__YP_009362242__Mount_Elgon_bat_virus__380434__D26-54_274-340
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24833.2 best | Rhabdo_glycop_CD | 52.0 | 1.10e-13 | 80.3% | 58.7% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d6wB02 | 6.10.140.740 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 43.0 | 4.87e-01 | 86.9% | 98.9% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 27.0 | 3.42e-01 | 82.8% | 74.3% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 26.0 | 3.04e-01 | 84.4% | 65.1% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 34.0 | 3.68e-01 | 85.2% | 79.4% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.50 | 28.0 | 3.33e-01 | 86.1% | 81.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4471802 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 26.0 | 3.02e-01 | 97.5% | 55.6% |
| 5053029 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.51 | 27.0 | 3.03e-01 | 84.4% | 63.2% |
D4
medium
residues 392-512