←Back to structures
virion_transmembrane_glycoprotein
Euk-VirAdelaide_River_virus
virion_transmembrane_glycoprotein__YP_009177242__Adelaide_River_virus__31612
Identity
- Accession:
- YP_009177242 ↗
- Protein ID:
- virion_transmembrane_glycoprotein
- Kingdom:
- euk
Quality
67.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Ephemerovirus›
Adelaide_River_virus
TaxID: 31612
Cluster
View cluster (24 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-71_207-296
Domain cluster:
rep: glycoprotein__YP_009305101__Wuhan_Louse_Fly_Virus_5__1608119__D70-87_212-294
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d6wA03 | 2.30.29.130 | Mainly Beta › Roll › PH-domain like › | 0.77 | 67.0 | 6.86e-01 | 97.0% | 96.8% |
| 2cmzA03 | 2.30.29.130 | Mainly Beta › Roll › PH-domain like › | 0.74 | 62.0 | 6.44e-01 | 97.0% | 96.8% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.65 | 54.0 | 4.91e-01 | 91.0% | 94.1% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 53.0 | 5.47e-01 | 88.0% | 96.7% |
| 1v61A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 52.0 | 4.80e-01 | 89.0% | 73.5% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 51.0 | 5.01e-01 | 88.0% | 97.3% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 50.0 | 5.02e-01 | 88.0% | 97.1% |
| 3wyfE00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 49.0 | 4.42e-01 | 86.0% | 67.6% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.44e-01 | 89.0% | 88.6% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.61 | 50.0 | 4.94e-01 | 89.0% | 98.1% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 49.0 | 4.90e-01 | 88.0% | 94.0% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.60 | 43.0 | 4.18e-01 | 74.0% | 93.6% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 49.0 | 4.79e-01 | 93.0% | 97.3% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 40.0 | 3.34e-01 | 77.0% | 40.5% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 47.0 | 4.52e-01 | 89.0% | 94.8% |
| 2re3A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.57 | 39.0 | 4.47e-01 | 73.0% | 100.0% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.56 | 44.0 | 4.23e-01 | 84.0% | 85.5% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 27.0 | 3.37e-01 | 90.0% | 77.6% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 34.0 | 3.76e-01 | 80.0% | 83.6% |
| 4gp3A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 36.0 | 3.45e-01 | 71.0% | 94.3% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 30.0 | 2.69e-01 | 92.0% | 38.2% |
| 4r8tB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 33.0 | 3.74e-01 | 85.0% | 89.0% |
| 1xzwA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.50 | 34.0 | 3.45e-01 | 100.0% | 70.4% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3939453 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 56.0 | 5.12e-01 | 90.0% | 90.8% |
| 4018977 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 54.0 | 5.07e-01 | 88.0% | 78.4% |
| 3523446 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.66 | 53.0 | 5.33e-01 | 86.0% | 95.0% |
| 3470360 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.66 | 53.0 | 4.86e-01 | 89.0% | 92.6% |
| 3922234 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 53.0 | 5.07e-01 | 88.0% | 83.5% |
| 4972327 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.65 | 34.0 | 3.56e-01 | 86.0% | 53.7% |
| 3781471 | 220.1.1.169 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_26 | 0.65 | 54.0 | 4.48e-01 | 91.0% | 83.4% |
| 3471641 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 54.0 | 5.06e-01 | 93.0% | 97.6% |
| 4019657 | 220.1.1.210 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7611 | 0.65 | 52.0 | 4.53e-01 | 88.0% | 66.5% |
| 3877687 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 52.0 | 4.77e-01 | 89.0% | 86.2% |
| 3312712 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 28.0 | 3.82e-01 | 98.0% | 84.0% |
| 4002643 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 50.0 | 4.07e-01 | 88.0% | 47.9% |
| 3927305 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 50.0 | 4.89e-01 | 89.0% | 97.3% |
| 3890418 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.61 | 50.0 | 4.93e-01 | 89.0% | 98.1% |
| 3538619 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 50.0 | 4.62e-01 | 90.0% | 80.8% |
| 3767975 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.60 | 49.0 | 4.79e-01 | 89.0% | 91.8% |
| 4024501 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 50.0 | 4.93e-01 | 91.0% | 95.2% |
| 2167707 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.60 | 48.0 | 4.05e-01 | 89.0% | 79.2% |
| 3710675 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.59 | 29.0 | 3.97e-01 | 86.0% | 95.8% |
| 3750640 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.58 | 47.0 | 4.60e-01 | 89.0% | 90.9% |
| 3591998 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.58 | 47.0 | 4.61e-01 | 90.0% | 94.5% |
| 3222570 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 46.0 | 4.48e-01 | 88.0% | 88.7% |
| 3800237 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 47.0 | 4.39e-01 | 90.0% | 72.0% |
| 3596842 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 45.0 | 4.29e-01 | 84.0% | 82.5% |
| 3990887 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.56 | 30.0 | 3.76e-01 | 91.0% | 90.9% |
| 5064712 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.55 | 38.0 | 3.16e-01 | 74.0% | 40.6% |
| 3459603 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.55 | 37.0 | 3.34e-01 | 100.0% | 50.0% |
| 3959060 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.54 | 39.0 | 3.29e-01 | 75.0% | 99.4% |
| 2124211 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.53 | 39.0 | 3.38e-01 | 78.0% | 99.4% |
| 3437709 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 26.0 | 3.31e-01 | 97.0% | 86.0% |
| 3928322 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.52 | 34.0 | 3.43e-01 | 75.0% | 63.8% |
| 3979842 | 4.1.1.45 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF903 | 0.52 | 27.0 | 3.26e-01 | 86.0% | 83.6% |
D2
high
residues 76-200
Domain cluster:
rep: putative_glycoprotein__YP_002905332__Nyavirus_midwayense__644609__D72-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00974.25 best | Rhabdo_glycop_FD | 92.2 | 4.20e-26 | 79.2% | 95.9% |
D3
medium
residues 38-52_299-351_473-517