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virulence_protein
Euk-VirPteropox_virus
virulence_protein__YP_009268760__Pteropox_virus__1873698
Identity
- Accession:
- YP_009268760 ↗
- Protein ID:
- virulence_protein
- Kingdom:
- euk
Quality
83.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Pteropopoxvirus›
Pteropox_virus
TaxID: 1873698
Cluster
View cluster (22 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 456-479_491-614
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04497.19 best | Pox_E2-like | 64.6 | 9.80e-18 | 98.7% | 15.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zarA03 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.72 | 38.0 | 4.63e-01 | 83.8% | 78.4% |
| 1vb5A01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.50 | 32.0 | 3.85e-01 | 100.0% | 100.0% |
D2
medium
residues 615-685
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 47.0 | 4.67e-01 | 87.3% | 64.5% |
| 1gjsA00 | 1.10.8.40 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain | 0.61 | 43.0 | 4.46e-01 | 91.5% | 80.0% |
| 2vqgA00 | 1.10.10.1280 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C | 0.59 | 40.0 | 3.90e-01 | 77.5% | 65.8% |
| 1l8qA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 38.0 | 4.33e-01 | 90.1% | 100.0% |
| 5e3iA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 47.0 | 4.26e-01 | 93.0% | 86.9% |
| 3afhA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.56 | 37.0 | 4.18e-01 | 77.5% | 96.0% |
| 3bb7A01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.52 | 44.0 | 3.33e-01 | 98.6% | 38.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4241645 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.59 | 51.0 | 4.79e-01 | 98.6% | 95.6% |
| 4298557 | 5049.1.3.1 ↗ | alpha complex topology › Ammonium transporter-related › Ammonium transporter-related › Na(+)-translocating NADH-quinone reductase subunit B › NQR2_RnfD_RnfE | 0.55 | 45.0 | 2.78e-01 | 94.4% | 34.3% |
| 4980637 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.55 | 40.0 | 3.60e-01 | 77.5% | 73.0% |
| 3203732 | 632.1.1.29 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › CYAA_C | 0.54 | 40.0 | 3.87e-01 | 84.5% | 81.2% |
| 4032006 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.54 | 39.0 | 3.23e-01 | 78.9% | 81.5% |
| 4660292 | 235.1.1.5 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transgly | 0.54 | 43.0 | 2.96e-01 | 88.7% | 70.2% |
| 3376651 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.53 | 40.0 | 2.95e-01 | 78.9% | 47.4% |
| 3404380 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.51 | 38.0 | 3.91e-01 | 94.4% | 84.3% |
| 3805676 | 1128.1.1.13 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 | 0.51 | 43.0 | 3.98e-01 | 94.4% | 88.9% |
| 3609532 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.50 | 42.0 | 3.76e-01 | 93.0% | 83.0% |