vp1054

Euk-Vir

Mamestra_configurata_nucleopolyhedrovirus_A

vp1054__NP_613216__Mamestra_configurata_nucleopolyhedrovirus_A__207830

Identity

79.6 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Mamestra_configurata_nucleopolyhedrovirus_A

TaxID: 207830

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 25-205

PDB

Domain cluster: rep: Capsid_protein,_VP1054__YP_009165649__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D42-49_61-180_185-192

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05789.17 best	Baculo_VP1054	232.3	1.60e-68	100.0%	56.5%

D2 medium residues 206-297

PDB

Domain cluster: rep: vp1054__YP_009049873__Peridroma_alphabaculovirus__1346829__D218-273_316-331

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05789.17 best	Baculo_VP1054	192.3	2.20e-56	100.0%	27.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4pdyA02	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.50	40.0	3.04e-01	88.0%	98.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4570106	376.1.1.37 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C	0.55	40.0	3.60e-01	83.7%	54.6%