vp1054

Euk-Vir

Spodoptera_frugiperda_granulovirus

vp1054__YP_009121924__Spodoptera_frugiperda_granulovirus__307454

Identity

76.4 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Spodoptera_frugiperda_granulovirus

TaxID: 307454

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 191-319

PDB

Domain cluster: rep: VP1054__YP_009249975__Mocis_latipes_granulovirus__2072024__D164-319

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05789.17 best	Baculo_VP1054	195.7	2.20e-57	100.0%	42.3%

D2 medium residues 62-190

PDB

Domain cluster: rep: Capsid_protein,_VP1054__YP_009165649__Perigonia_lusca_single_nucleopolyhedrovirus__1675865__D42-49_61-180_185-192

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05789.17 best	Baculo_VP1054	121.1	1.00e-34	100.0%	38.9%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5034879	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.61	24.0	2.95e-01	79.8%	53.8%
2731314	11.1.1.96 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set	0.53	28.0	3.27e-01	73.6%	71.9%
3435721	5.3.1.1 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop	0.52	32.0	3.67e-01	80.6%	83.2%