vp39

Euk-Vir

Clostera_anachoreta_granulovirus

vp39__YP_004376289__Clostera_anachoreta_granulovirus__283675

Identity

70.3 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Clostera_anachoreta_granulovirus

TaxID: 283675

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 170-283

PDB

D2 medium residues 12-92

PDB

Domain cluster: rep: vp39__YP_010086341__Hyposidra_talaca_nucleopolyhedrovirus__1070315__D23-87

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04501.18 best	Baculo_VP39	101.8	6.20e-29	100.0%	32.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2mdrA00	3.30.160.20	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.51	33.0	3.16e-01	85.2%	55.3%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3933064	3382.1.1.1 ↗	alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt	0.55	39.0	2.73e-01	75.3%	41.7%
4013407	2002.1.1.0 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels	0.54	45.0	3.05e-01	91.4%	47.2%
4898995	3121.1.1.1 ↗	a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA	0.52	27.0	2.67e-01	72.8%	42.2%
1723386	330.1.1.0 ↗	a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like	0.52	29.0	3.42e-01	88.9%	95.5%
4995209	2004.1.1.308 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21	0.51	36.0	2.91e-01	72.8%	42.6%
4023633	4023.1.1.0 ↗	a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core	0.50	34.0	3.15e-01	70.4%	55.5%