vp39

Euk-Vir

Agrotis_segetum_nucleopolyhedrovirus_B

vp39__YP_009112643__Agrotis_segetum_nucleopolyhedrovirus_B__1580580

Identity

70.8 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Agrotis_segetum_nucleopolyhedrovirus_B

TaxID: 1580580

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 175-246_269-297

PDB

Domain cluster: rep: VP39__YP_009666419__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D175-245_296-307

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04501.18 best	Baculo_VP39	56.7	3.80e-15	67.3%	21.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4879752	2498.1.1.15 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M27	0.54	41.0	2.86e-01	83.2%	84.8%

D2 medium residues 16-96

PDB

Domain cluster: rep: vp39__YP_010086341__Hyposidra_talaca_nucleopolyhedrovirus__1070315__D23-87

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04501.18 best	Baculo_VP39	77.0	2.30e-21	100.0%	33.6%

D3 medium residues 97-163

PDB

Domain cluster: rep: VP39__YP_009666419__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D49-56_94-162

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04501.18 best	Baculo_VP39	38.9	1.00e-09	100.0%	28.3%