vp39

Euk-Vir

Catopsilia_pomona_nucleopolyhedrovirus

vp39__YP_009255313__Catopsilia_pomona_nucleopolyhedrovirus__1850906

Identity

71.2 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Catopsilia_pomona_nucleopolyhedrovirus

TaxID: 1850906

View cluster (46 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-162

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04501.18 best	Baculo_VP39	120.8	1.00e-34	100.0%	47.1%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4160831	109.4.1.1255 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1	0.52	46.0	2.87e-01	99.1%	32.5%

D2 high residues 175-248_277-312

PDB

Domain cluster: rep: VP39__YP_009666419__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D175-245_296-307

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04501.18 best	Baculo_VP39	60.2	3.30e-16	70.0%	24.6%