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vp39_capsid
Euk-VirMamestra_configurata_nucleopolyhedrovirus_A
vp39_capsid__NP_613182__Mamestra_configurata_nucleopolyhedrovirus_A__207830
Identity
- Accession:
- NP_613182 ↗
- Protein ID:
- vp39_capsid
- Kingdom:
- euk
Quality
73.5
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Mamestra_configurata_nucleopolyhedrovirus_A
TaxID: 207830
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-298
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04501.18 best | Baculo_VP39 | 189.8 | 8.40e-56 | 79.6% | 93.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.56 | 10.0 | 2.64e-01 | 81.7% | 87.0% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.56 | 14.0 | 2.60e-01 | 73.6% | 68.8% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 17.0 | 2.98e-01 | 84.5% | 83.7% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.52 | 15.0 | 2.78e-01 | 77.1% | 86.7% |