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zinc-ribbon-containing_protein

Euk-Vir

Tunisvirus_fontaine2

zinc-ribbon-containing_protein__YP_009507026__Tunisvirus_fontaine2__1421067

Identity

Accession:
YP_009507026 ↗
Protein ID:
zinc-ribbon-containing_protein
Kingdom:
euk

Quality

72.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Tunisvirus_fontaine2

TaxID: 1421067

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 58-112
PDB
Domain cluster: rep: OP186293.1__UVD36523.1__RCXUPER_105__00076__D11-53
D2 high residues 466-575
PDB
Domain cluster: rep: IMGVR_UViG_3300025584_000284-3300025584-Ga0209774_100031726__D151-252
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24308.2 best DUF7487 82.7 4.70e-23 84.5% 43.2%
D3 medium residues 132-196
PDB
Domain cluster: rep: NC_031022.1__YP_009280252.1__BI056_gp065__00065__D70-126
D4 medium residues 202-257
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8jpdG02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.64 46.0 3.15e-01 78.6% 24.8%
1ecxB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 53.0 4.25e-01 100.0% 78.3%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.56e-01 100.0% 75.0%
6n9aB02 3.30.420.200 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.59 41.0 3.89e-01 82.1% 59.4%
1m32A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 50.0 4.12e-01 100.0% 75.7%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.59 43.0 3.27e-01 85.7% 30.7%
3hdoA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 50.0 3.91e-01 100.0% 57.7%
5usrA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 47.0 3.96e-01 100.0% 73.7%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 46.0 3.59e-01 96.4% 61.0%
3bb8A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 47.0 3.71e-01 100.0% 84.8%
2po3A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 46.0 3.57e-01 100.0% 72.8%
1w23A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 47.0 3.94e-01 98.2% 79.6%
3dr4A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 46.0 3.72e-01 100.0% 86.4%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 3.34e-01 82.1% 53.3%
2mqdA00 3.30.1460.60 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 46.0 3.70e-01 98.2% 77.3%
2rlpA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.55 44.0 4.24e-01 100.0% 79.1%
5k8bA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 46.0 3.52e-01 100.0% 90.3%
2g7iA02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.54 44.0 4.25e-01 94.6% 92.3%
3qo6A03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.54 40.0 3.49e-01 89.3% 97.1%
2bkwA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 43.0 3.58e-01 100.0% 73.3%
2wiiC04 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.53 43.0 4.31e-01 96.4% 91.2%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 33.0 2.80e-01 82.1% 31.5%
1ekzA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 46.0 4.20e-01 98.2% 88.2%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.52 39.0 2.60e-01 85.7% 84.9%
1ss4A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 43.0 3.32e-01 100.0% 83.2%
3sw0X01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.51 41.0 4.12e-01 98.2% 89.8%
1g44C04 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.51 34.0 3.71e-01 85.7% 97.6%
2yocB01 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 41.0 3.25e-01 98.2% 84.8%
4qbnA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.50 43.0 3.71e-01 100.0% 91.4%
2db5A00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.50 36.0 2.89e-01 80.4% 45.3%
5t3dA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 36.0 2.70e-01 82.1% 81.7%
4b63A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 37.0 2.25e-01 83.9% 94.2%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4036509 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.64 55.0 4.25e-01 100.0% 60.8%
3496292 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 46.0 4.70e-01 85.7% 85.5%
3632428 211.1.1.24 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Ble-like_N 0.60 49.0 3.76e-01 92.9% 45.2%
3784140 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 5.01e-01 94.6% 94.5%
3673944 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.60 48.0 3.61e-01 91.1% 39.6%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.64e-01 96.4% 85.3%
1214267 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.59 43.0 4.10e-01 85.7% 63.6%
3972760 809.2.1.0 ↗ a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.57 48.0 4.54e-01 100.0% 88.6%
4972351 3016.1.1.6 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › DegT_DnrJ_EryC1 0.57 47.0 3.83e-01 100.0% 88.3%
4642685 7503.1.1.3 ↗ a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › TolB_N 0.56 46.0 3.73e-01 100.0% 75.2%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.23e-01 96.4% 68.8%
3864942 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.56 46.0 4.43e-01 96.4% 92.3%
3961733 330.10.1.0 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain 0.55 47.0 4.10e-01 100.0% 78.9%
1160869 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.55 40.0 4.02e-01 85.7% 77.2%
1503831 101.1.8.6 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › ResT-TelK_cat 0.54 41.0 3.23e-01 87.5% 52.2%
4237612 3006.1.1.6 ↗ a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C 0.54 43.0 3.89e-01 98.2% 94.1%
5039971 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.53 39.0 3.29e-01 89.3% 43.8%
4414890 3439.1.1.0 ↗ a+b two layers › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain › PafA/Dop C-terminal domain 0.53 43.0 4.25e-01 100.0% 88.3%
3399544 5.1.3.25 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.52 43.0 2.78e-01 98.2% 23.0%
3169173 3241.1.1.1 ↗ alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › GPP34 0.52 38.0 2.58e-01 85.7% 83.2%
3859036 389.1.2.1 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.52 42.0 3.92e-01 100.0% 72.0%
3840927 389.1.2.1 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.52 42.0 4.17e-01 100.0% 91.7%
5040978 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.51 42.0 3.00e-01 100.0% 35.6%
3724857 3241.1.1.1 ↗ alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › GPP34 0.50 38.0 2.58e-01 89.3% 84.6%
3772962 389.1.2.1 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.50 42.0 4.17e-01 100.0% 93.3%
D5 medium residues 280-361
PDB
D6 medium residues 372-460
PDB