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zinc_finger-like_protein

Euk-Vir

Eastern_grey_kangaroopox_virus

zinc_finger-like_protein__YP_010085411__Eastern_grey_kangaroopox_virus__2042482

Identity

Accession:
YP_010085411 ↗
Protein ID:
zinc_finger-like_protein
Kingdom:
euk

Quality

56.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 110-147
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05077.19 best DUF678 43.3 4.70e-11 97.4% 48.0%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m0wA04 3.40.50.1760 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic 0.68 51.0 3.67e-01 89.5% 69.8%
2vugA03 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.64 44.0 3.28e-01 71.1% 49.0%
1xezA02 2.70.240.20 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/Hemolysin toxin, cytolysin domain 0.63 54.0 3.10e-01 100.0% 23.6%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 46.0 2.70e-01 81.6% 97.9%
1l5jA02 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.61 44.0 2.80e-01 76.3% 78.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.60 45.0 4.16e-01 86.8% 61.1%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 41.0 2.43e-01 71.1% 9.2%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 3.54e-01 89.5% 58.7%
3kzsA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 40.0 2.52e-01 73.7% 21.7%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 41.0 2.48e-01 81.6% 22.5%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 41.0 3.20e-01 86.8% 56.7%
2o0aA00 3.40.850.20 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › 0.57 41.0 2.56e-01 84.2% 87.0%
2poiA00 1.10.1170.10 Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 0.57 38.0 3.20e-01 73.7% 37.2%
2i50A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 40.0 2.99e-01 81.6% 84.4%
2wl1A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.56 42.0 2.80e-01 89.5% 66.0%
3gv4A00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.56 39.0 3.10e-01 81.6% 78.8%
1ej6A04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 44.0 2.83e-01 100.0% 17.0%
2nutA02 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.55 43.0 3.75e-01 89.5% 65.6%
1gqeA02 3.30.70.1660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 2.94e-01 92.1% 88.3%
2xzlA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 2.56e-01 78.9% 50.9%
4dw8A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 38.0 2.66e-01 81.6% 61.3%
1rjhA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.54 41.0 3.05e-01 89.5% 35.6%
1bm8A00 3.10.260.10 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain 0.53 39.0 3.06e-01 86.8% 43.4%
2aklA01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 37.0 3.71e-01 84.2% 79.1%
1m2vB03 2.30.30.380 Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 0.51 38.0 3.44e-01 89.5% 62.9%
7qryB01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.51 37.0 2.65e-01 89.5% 54.2%
3iylW04 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 39.0 2.54e-01 100.0% 16.3%
3s8iA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 39.0 2.96e-01 97.4% 77.4%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3654449 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.72 49.0 5.37e-01 71.1% 100.0%
3841843 386.1.1.64 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_12 0.68 46.0 4.14e-01 71.1% 54.5%
3503411 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.68 47.0 4.52e-01 73.7% 62.2%
3317170 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.68 48.0 4.62e-01 76.3% 66.7%
4990102 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.66 45.0 4.30e-01 71.1% 66.7%
3389846 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.66 47.0 4.07e-01 78.9% 49.2%
3168082 2003.1.10.6 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › GSH_synthase 0.66 52.0 3.86e-01 97.4% 78.3%
3602053 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 48.0 2.78e-01 81.6% 72.9%
3940506 386.1.1.71 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 0.65 46.0 4.34e-01 78.9% 60.0%
3537939 386.1.1.316 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF30902 0.64 43.0 4.16e-01 71.1% 71.1%
3540779 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.64 44.0 4.09e-01 73.7% 60.0%
3333592 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 44.0 2.81e-01 73.7% 20.5%
3578353 2005.1.1.29 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g 0.62 47.0 2.74e-01 86.8% 11.3%
3493651 2005.1.1.29 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g 0.62 43.0 2.76e-01 84.2% 13.5%
4001939 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.62 43.0 3.62e-01 71.1% 38.6%
3397452 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.62 43.0 3.81e-01 73.7% 48.3%
3913145 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.61 44.0 4.05e-01 78.9% 54.7%
3825571 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.61 47.0 4.11e-01 81.6% 68.3%
3537482 376.1.4.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR_1 0.61 42.0 3.95e-01 73.7% 56.0%
3935829 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.61 43.0 3.79e-01 71.1% 45.8%
3393809 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.61 45.0 2.90e-01 86.8% 22.0%
4027519 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.60 41.0 4.24e-01 73.7% 94.3%
3628498 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.60 43.0 3.61e-01 76.3% 47.1%
3537747 386.1.1.71 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 0.60 43.0 3.93e-01 78.9% 58.2%
3794324 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 43.0 3.63e-01 76.3% 47.1%
3882068 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.60 44.0 4.08e-01 76.3% 66.0%
4962043 386.1.1.422 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF26266 0.60 45.0 4.12e-01 86.8% 74.5%
4000428 4309.1.1.1 ↗ a+b complex topology › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases › DUSP, domain in ubiquitin-specific proteases › DUSP 0.60 47.0 3.30e-01 94.7% 57.9%
3341280 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.59 45.0 3.30e-01 92.1% 87.2%
3783751 223.1.1.21 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like 0.59 46.0 2.80e-01 100.0% 12.1%
3995519 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.58 42.0 3.21e-01 81.6% 78.0%
3652684 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.58 40.0 3.38e-01 71.1% 36.0%
3260511 386.1.1.71 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 0.58 41.0 3.83e-01 81.6% 56.4%
3422037 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.58 39.0 3.16e-01 73.7% 57.6%
3259856 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.57 41.0 3.59e-01 81.6% 50.8%
3786588 223.1.1.21 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like 0.57 43.0 2.67e-01 100.0% 12.6%
3906547 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.57 43.0 3.21e-01 92.1% 82.5%
3741937 7101.1.1.1 ↗ extended segments › Prp8-binding region of SLU7 › Prp8-binding region of SLU7 › Prp8-binding region of SLU7 › Slu7 0.57 40.0 3.08e-01 81.6% 37.1%
3977942 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 2.73e-01 76.3% 55.9%
5036301 375.1.1.37 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon 0.56 38.0 3.85e-01 73.7% 82.5%
4927603 873.1.1.1 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R 0.56 40.0 2.73e-01 81.6% 19.4%
3716634 109.4.1.1357 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_16 0.56 41.0 2.50e-01 89.5% 9.9%
3248868 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.56 40.0 3.22e-01 89.5% 83.0%
3998218 376.1.1.5 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP 0.55 41.0 2.84e-01 86.8% 81.8%
3613928 375.1.1.137 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIB_Zn-ribbon_Tryp 0.55 37.0 3.62e-01 71.1% 73.3%
3506351 375.1.1.44 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-NADH-PPase 0.55 38.0 3.88e-01 78.9% 97.1%
3610751 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 39.0 3.99e-01 76.3% 82.9%
3928378 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 40.0 3.33e-01 89.5% 58.8%
5075345 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.54 39.0 3.69e-01 81.6% 70.0%
3171207 3016.1.1.7 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Cys_Met_Meta_PP 0.54 42.0 2.79e-01 97.4% 84.2%
4026585 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 38.0 2.48e-01 78.9% 31.6%
3808970 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 38.0 3.66e-01 84.2% 74.0%
3992934 3964.1.1.1 ↗ beta meanders › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE domain of RBM10 › OCRE 0.53 36.0 3.27e-01 86.8% 46.2%
4270967 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.52 39.0 2.87e-01 84.2% 54.5%
3275931 2.1.1.87 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB 0.52 39.0 3.08e-01 100.0% 90.4%
3460651 2.1.1.37 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.52 38.0 2.85e-01 81.6% 29.0%
3589899 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 35.0 3.46e-01 73.7% 71.1%
3556873 330.3.1.0 ↗ a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.51 37.0 3.02e-01 81.6% 51.2%
1210727 375.1.1.30 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 0.51 38.0 3.12e-01 89.5% 46.5%