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zinc_finger_protein
Euk-VirMarseillevirus_marseillevirus
zinc_finger_protein__YP_003407054__Marseillevirus_marseillevirus__694581
Identity
- Accession:
- YP_003407054 ↗
- Protein ID:
- zinc_finger_protein
- Kingdom:
- euk
Quality
76.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_marseillevirus
TaxID: 694581
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-108
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r8gA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.56 | 49.0 | 3.40e-01 | 100.0% | 86.9% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 32.0 | 3.78e-01 | 72.9% | 87.7% |
| 5hexA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.53 | 41.0 | 3.06e-01 | 86.5% | 65.3% |
| 1hywA00 | 3.30.1580.10 | Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W | 0.52 | 31.0 | 3.62e-01 | 85.4% | 96.6% |
| 2gu0A02 | 3.30.428.20 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain | 0.51 | 37.0 | 3.22e-01 | 78.1% | 54.1% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.51 | 28.0 | 3.26e-01 | 72.9% | 82.8% |
| 1xriA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 42.0 | 3.59e-01 | 89.6% | 84.1% |
| 8anqA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 45.0 | 3.44e-01 | 100.0% | 56.7% |
| 1twcA01 | 4.10.860.120 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › RNA polymerase II, clamp domain | 0.50 | 44.0 | 3.99e-01 | 99.0% | 77.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3768792 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.77 | 38.0 | 4.22e-01 | 90.6% | 58.7% |
| 3742973 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.70 | 41.0 | 5.00e-01 | 72.9% | 93.3% |
| None | — | 0.66 | 24.0 | 3.05e-01 | 86.5% | 50.8% | |
| 3772534 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.59 | 33.0 | 3.46e-01 | 91.7% | 60.0% |
| 3697355 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 33.0 | 2.86e-01 | 71.9% | 38.7% |
| 3945091 | 3227.1.1.1 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC | 0.53 | 39.0 | 2.66e-01 | 85.4% | 20.3% |
| 3612103 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.51 | 33.0 | 3.37e-01 | 92.7% | 66.3% |
| 3695374 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 43.0 | 2.79e-01 | 95.8% | 44.7% |
| 3680362 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.50 | 38.0 | 2.34e-01 | 81.2% | 66.8% |