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zinc_finger_protein

Euk-Vir

Tunisvirus_fontaine2

zinc_finger_protein__YP_009507017__Tunisvirus_fontaine2__1421067

Identity

Accession:
YP_009507017 ↗
Protein ID:
zinc_finger_protein
Kingdom:
euk

Quality

70.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Tunisvirus_fontaine2

TaxID: 1421067

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 50-98
PDB
Domain cluster: rep: hypothetical_protein_GMAR_ORF55__YP_009310172__Golden_Marseillevirus__1720526__D41-104
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12874.14 best zf-met 19.8 1.10e-03 46.9% 88.0%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5k5iA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.67 49.0 4.88e-01 81.6% 75.0%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.56 45.0 3.15e-01 91.8% 74.4%
4q7qB00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 41.0 2.71e-01 89.8% 54.9%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 36.0 2.92e-01 75.5% 39.3%
2hy5B00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.51 37.0 2.85e-01 81.6% 77.3%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.51 35.0 2.73e-01 77.6% 30.8%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.50 39.0 2.81e-01 95.9% 98.3%
4uwmA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.50 36.0 2.30e-01 87.8% 80.9%
5mi7A03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.50 39.0 2.57e-01 95.9% 60.6%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3222487 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.75 51.0 5.33e-01 71.4% 77.8%
3936851 3949.1.1.0 ↗ alpha arrays › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain › tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain 0.73 52.0 3.12e-01 77.6% 11.4%
3630429 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.65 45.0 4.05e-01 73.5% 85.3%
3800233 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.63 42.0 4.14e-01 71.4% 63.6%
3887272 386.1.1.41 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf_C2H2_ZHX 0.62 44.0 3.62e-01 75.5% 50.6%
3910228 386.1.1.26 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 0.60 45.0 3.55e-01 83.7% 46.4%
3929908 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 41.0 2.79e-01 73.5% 30.9%
3226948 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 49.0 3.98e-01 100.0% 58.0%
3781291 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 40.0 3.27e-01 75.5% 38.0%
3936849 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 40.0 3.88e-01 75.5% 69.1%
3750703 386.1.1.238 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.55 44.0 3.85e-01 95.9% 94.1%
3695190 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 43.0 3.82e-01 100.0% 57.3%
3398688 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.55 44.0 4.23e-01 100.0% 93.3%
3634484 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.55 45.0 4.12e-01 100.0% 94.3%
3725359 109.4.1.1939 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ECM29_N, HEAT_ECM29 0.54 41.0 2.24e-01 91.8% 15.4%
3680292 386.1.1.57 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › TRAFD1-XIAF1_ZnF 0.53 42.0 4.00e-01 100.0% 98.5%
3547367 386.1.1.57 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › TRAFD1-XIAF1_ZnF 0.52 42.0 4.21e-01 95.9% 100.0%
3589191 142.1.1.10 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › HTH_16 0.51 36.0 3.28e-01 73.5% 61.4%
D2 high residues 108-279
PDB
Domain cluster: rep: putative_zinc_finger_protein__YP_009094848__Melbournevirus__1560514__D110-260
D3 high residues 298-443
PDB